Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_H08
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067219-11|AAC17032.1| 227|Caenorhabditis elegans Hypothetical... 92 5e-19
Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical p... 83 2e-16
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 29 3.3
U28729-7|AAO38609.1| 158|Caenorhabditis elegans Phosphodiestera... 29 3.3
U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiestera... 29 3.3
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 3.3
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 29 3.3
AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical... 29 4.3
Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z35663-10|CAA84731.1| 278|Caenorhabditis elegans Hypothetical p... 28 7.6
>AF067219-11|AAC17032.1| 227|Caenorhabditis elegans Hypothetical
protein R12E2.11 protein.
Length = 227
Score = 91.9 bits (218), Expect = 5e-19
Identities = 48/111 (43%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Frame = +2
Query: 188 DLAVQLFDAGAVRLEDIEAKVGRRTPIYFDLRVIVSHPKLM-VAVSHQLEKLI-KDVHHD 361
D L+ R + K G+ TPIY DLR I+S P+++ +A EK++ ++ D
Sbjct: 32 DFFENLYQMECFRTGEFYLKSGQMTPIYIDLRRIMSSPRVLRMAAQAMCEKIVASNLKFD 91
Query: 362 MICGVPYAALPLAVVISINTDRPMIMKRKETKLYATKKLLEGVYEKNQTCL 514
+ GVPYAALPLA ++S + PM+MKRKE K Y TK+L+EGVY+ T L
Sbjct: 92 YVVGVPYAALPLATLVSDILNVPMLMKRKEAKAYGTKQLIEGVYQPGGTVL 142
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = +3
Query: 513 LXVEDVVTSGGSLLETVETLRKEGLIVTHAVIVLEREQGGASVLEANGIAVKSLFTLTNL 692
L VEDVVTSG S+ ET E +R E L+VT A+ VL+R+QG + L + + S T+ +
Sbjct: 142 LLVEDVVTSGESIRETAEAIRNENLLVTDAIAVLDRQQGATANLAEDNLNFLSFLTMEKI 201
Query: 693 VRMLHKAGRIDNDTVELIFDHI 758
+ L + + I H+
Sbjct: 202 LDGLITKNEMTEERKHEIIAHL 223
>Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 83.4 bits (197), Expect = 2e-16
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Frame = +2
Query: 185 QDLAVQLFDAGAVRLEDIEAKVGRRTPIYFDLRVIVSHPKLMVAVSHQLEKL--IKDVHH 358
++L Q+ A + + + K G+ +PIY DLR HP L++ +S + K I +V +
Sbjct: 15 RNLLRQMLKASVFKFGEFQLKSGQISPIYIDLRECFGHPGLLMLISEAISKQVEISEVQY 74
Query: 359 DMICGVPYAALPLAVVISIN-TDRPMIMKRKETKLYATKKLLEGVYEKN 502
+ G+PYAALP A V + N +P+++ RKE K Y TKKL+EG+Y+ N
Sbjct: 75 AGVLGIPYAALPYASVAAGNYLKKPLLIVRKEAKSYGTKKLIEGLYQPN 123
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/75 (36%), Positives = 46/75 (61%)
Frame = +3
Query: 507 RALXVEDVVTSGGSLLETVETLRKEGLIVTHAVIVLEREQGGASVLEANGIAVKSLFTLT 686
R + +EDVVT+GGS+L+ V+ L E L+ + +L+REQGG L+ G+ + SL +
Sbjct: 125 RLILIEDVVTTGGSILDVVKVLHTENLVASDVFCILDREQGGRQKLQDAGVTLHSLLDMQ 184
Query: 687 NLVRMLHKAGRIDND 731
++ L+ G I ++
Sbjct: 185 TVLTFLYSTGAIGDE 199
>Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 83.4 bits (197), Expect = 2e-16
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Frame = +2
Query: 185 QDLAVQLFDAGAVRLEDIEAKVGRRTPIYFDLRVIVSHPKLMVAVSHQLEKL--IKDVHH 358
++L Q+ A + + + K G+ +PIY DLR HP L++ +S + K I +V +
Sbjct: 15 RNLLRQMLKASVFKFGEFQLKSGQISPIYIDLRECFGHPGLLMLISEAISKQVEISEVQY 74
Query: 359 DMICGVPYAALPLAVVISIN-TDRPMIMKRKETKLYATKKLLEGVYEKN 502
+ G+PYAALP A V + N +P+++ RKE K Y TKKL+EG+Y+ N
Sbjct: 75 AGVLGIPYAALPYASVAAGNYLKKPLLIVRKEAKSYGTKKLIEGLYQPN 123
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/75 (36%), Positives = 46/75 (61%)
Frame = +3
Query: 507 RALXVEDVVTSGGSLLETVETLRKEGLIVTHAVIVLEREQGGASVLEANGIAVKSLFTLT 686
R + +EDVVT+GGS+L+ V+ L E L+ + +L+REQGG L+ G+ + SL +
Sbjct: 125 RLILIEDVVTTGGSILDVVKVLHTENLVASDVFCILDREQGGRQKLQDAGVTLHSLLDMQ 184
Query: 687 NLVRMLHKAGRIDND 731
++ L+ G I ++
Sbjct: 185 TVLTFLYSTGAIGDE 199
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
F31D5.5 protein.
Length = 1788
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -2
Query: 649 ASSTLAPPCSRSSTITACVTIKPSLRKVSTVSSKLPPDVTTSSTXKARLIFFI 491
++ST+ S+TIT+ T+ S STV++ PP TT + +F I
Sbjct: 919 STSTVNSTTITSTTITS-TTVTTSSPSTSTVTTTTPPSTTTQDDVRNHFLFDI 970
>U28729-7|AAO38609.1| 158|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformf protein.
Length = 158
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 664 TAIPFASSTLAPPCSRSSTITACVTIKPSLRKV-STVSSKLPPDVTTSSTXKA 509
T+ P ASST P + T+ VTI S K+ S+ SS PP T ST A
Sbjct: 40 TSSPSASSTSRTPPAALPPRTSAVTIPGSNHKLTSSASSYHPPRELTVSTFSA 92
>U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformd protein.
Length = 674
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 664 TAIPFASSTLAPPCSRSSTITACVTIKPSLRKV-STVSSKLPPDVTTSSTXKA 509
T+ P ASST P + T+ VTI S K+ S+ SS PP T ST A
Sbjct: 40 TSSPSASSTSRTPPAALPPRTSAVTIPGSNHKLTSSASSYHPPRELTVSTFSA 92
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -2
Query: 664 TAIPFASSTLAPPCSRSSTITACVTIKPSLRKVSTVSSKLPPDVTTSST 518
TA S+T+ P +R T T + + +T ++ +PP TTS+T
Sbjct: 179 TASTVPSTTVIPTTTRIPTTVTTTTETTTTPQSTTTTTTVPPTTTTSTT 227
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -2
Query: 649 ASSTLAPPCSRSSTITACVTIKPSLRKVSTVSSKLPPDVTTSSTXKARLIFFI 491
++ST+ S+TIT+ T+ S STV++ PP TT + +F I
Sbjct: 888 STSTVNSTTITSTTITS-TTVTTSSPSTSTVTTTTPPSTTTQDDVRNHFLFDI 939
>AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
protein Y75B8A.24 protein.
Length = 2121
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 668 FHCNTIRFEYTSATLFPLEYYYGMCNYQT 582
F+C + F+ S++L+P E+Y +C T
Sbjct: 780 FYCTVLGFDVESSSLWPEEWYNAVCETAT 808
>Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical
protein F52F12.2 protein.
Length = 370
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -2
Query: 673 SDFTAIPFASSTLAPPCSRSSTITACVTIKPSLRKVSTVSSKLPPDVTTSS 521
S + P SS+ P SS I+ P+L ST S PP ++ S+
Sbjct: 266 SGYCPCPRRSSSRVSPSGGSSPISDTFIASPTLLPPSTTLSSTPPTISPSA 316
>Z35663-10|CAA84731.1| 278|Caenorhabditis elegans Hypothetical
protein T04A8.12 protein.
Length = 278
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 71 YVCNVKCFISLFQVFFLL 124
++CN+ CF++L + FFLL
Sbjct: 124 FLCNLACFLNLLENFFLL 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,444,480
Number of Sequences: 27780
Number of extensions: 389916
Number of successful extensions: 1090
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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