Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_H07
(1000 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 48 2e-06
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 46 1e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 44 4e-05
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 40 4e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 40 7e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.004
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.005
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.048
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 32 0.11
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.19
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.78
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.78
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.0
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 1.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.1
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 4.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 5.5
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 9.5
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 9.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 48.4 bits (110), Expect = 2e-06
Identities = 40/143 (27%), Positives = 42/143 (29%), Gaps = 3/143 (2%)
Frame = +3
Query: 570 PPPPXXGQPXXXGXXGXRGDTPGXXGAPXAKNXXXAPKXXFPXXPXPXXPXQXXXXXXXX 749
PPPP P G P + A + AP P P P
Sbjct: 362 PPPPPRSAPST-------GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP-LGNASRTS 413
Query: 750 AKPPPXPPXETXXXPPPXPPXXPPXGP-PTXXXTPXPPXXPXPPPGXPPXXP--PXXPPX 920
P P PP PP PP PP P P PP P PP P P P PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP-LPAGMPAAPPLPPA 472
Query: 921 XXXPXXXXXKAPXXPTXPXPXXP 989
P AP P P
Sbjct: 473 APAPPPAPAPAPAAPVASIAELP 495
Score = 41.9 bits (94), Expect = 1e-04
Identities = 37/148 (25%), Positives = 41/148 (27%), Gaps = 5/148 (3%)
Frame = +3
Query: 570 PPPPXX---GQPXXXGXXGXRGDTPGXXGAPXAKNXXXAPKXXFPXXPXPXXPXQXXXXX 740
PPPP G+P G P P + P P P +
Sbjct: 314 PPPPSRRNRGKPPI-GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 741 XXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPP- 917
+PPP PP PP P P PP PP PP PP
Sbjct: 373 GR--QPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 918 -XXXXPXXXXXKAPXXPTXPXPXXPXIP 998
P AP P P P P P
Sbjct: 431 LPPSAPPSLPMGAPAAPPLP-PSAPIAP 457
Score = 41.9 bits (94), Expect = 1e-04
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 2/85 (2%)
Frame = +3
Query: 750 AKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXX 929
+ PP PP P PP T P P PP PP PP P
Sbjct: 386 SNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPA 445
Query: 930 PXXXXXKAPXXPTXP--XPXXPXIP 998
AP P P P P +P
Sbjct: 446 APPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/103 (27%), Positives = 29/103 (28%), Gaps = 6/103 (5%)
Frame = +3
Query: 708 PXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGX 887
P P A PP T P P PP PP PP+ P PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP--------PSAPPSL 439
Query: 888 P------PXXPPXXPPXXXXPXXXXXKAPXXPTXPXPXXPXIP 998
P P PP P P P P P P P
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 34.3 bits (75), Expect = 0.027
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +3
Query: 780 TXXXPPPXPPXXPPXGPPTXXXT---PXPPXXPXPPPGXPPXXPPXXPPXXXXP 932
T PP PP P PP + P PP P PP PP PP P
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIP-PPSNGTVSSPPNSPPRPIAP 277
Score = 33.1 bits (72), Expect = 0.063
Identities = 20/81 (24%), Positives = 20/81 (24%)
Frame = +3
Query: 756 PPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXXPX 935
P PP P PP PP T P P P P P P P
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS 296
Query: 936 XXXXKAPXXPTXPXPXXPXIP 998
A P P P
Sbjct: 297 SRVSAAALAANKKRPPPPPPP 317
Score = 29.5 bits (63), Expect = 0.78
Identities = 34/125 (27%), Positives = 38/125 (30%), Gaps = 29/125 (23%)
Frame = +3
Query: 702 PXPXXPXQXXXXXXXXAKPPPXPPXETXXX----------PPPXPP-----XXPPXGPPT 836
P P P +KPP PP PPP PP PP G +
Sbjct: 272 PRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGS 331
Query: 837 XXXT-PXPP---------XXPXPPPG--XPPXXPPXXPP--XXXXPXXXXXKAPXXPTXP 974
+ P PP P PP G PP PP P P +A P P
Sbjct: 332 SNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 975 XPXXP 989
P P
Sbjct: 392 PPAIP 396
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 45.6 bits (103), Expect = 1e-05
Identities = 32/126 (25%), Positives = 34/126 (26%), Gaps = 7/126 (5%)
Frame = +3
Query: 633 PGXXGAPXAKNXXXAPKXXFPXXPXPXX-PXQXXXXXXXXAKPPPXPPXETXXXPPPXPP 809
P P K P P P P + PP P P P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Query: 810 XXPPXGPPTXXXTPXP------PXXPXPPPGXPPXXPPXXPPXXXXPXXXXXKAPXXPTX 971
PP P+ P P P P P G PP PP P P P T
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 972 PXPXXP 989
P P
Sbjct: 1217 PPVPTP 1222
Score = 45.2 bits (102), Expect = 1e-05
Identities = 32/125 (25%), Positives = 34/125 (27%), Gaps = 3/125 (2%)
Frame = +3
Query: 633 PGXXGAPXAKNXXXAPKXXFPXXPXPXXPXQXXXXXXXXAKP--PPXPPXETXXXPPPXP 806
P GAP P P P P A PP P P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 807 PXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXP-PXXXXPXXXXXKAPXXPTXPXPX 983
PP P+ P P PP P P P P P A P P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 984 XPXIP 998
P +P
Sbjct: 1197 APPVP 1201
Score = 40.7 bits (91), Expect = 3e-04
Identities = 33/126 (26%), Positives = 35/126 (27%), Gaps = 4/126 (3%)
Frame = +3
Query: 633 PGXXGAPXA-KNXXXAPKXXFPXXPXPXX-PXQXXXXXXXXAKPPPXPPXETXXXPPPXP 806
P GAP K AP P P P + PP P P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 807 PXX-PPXGPPTXXXTPXPPXXPXPPPGXPPXX-PPXXPPXXXXPXXXXXKAPXXPTXPXP 980
PP P P PP PP P PP PP P P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA 1234
Query: 981 XXPXIP 998
P +P
Sbjct: 1235 KAPPVP 1240
Score = 40.3 bits (90), Expect = 4e-04
Identities = 34/128 (26%), Positives = 36/128 (28%), Gaps = 4/128 (3%)
Frame = +3
Query: 561 AXGPPPPXXGQPXXXGXXGXRGDTPGXXGAPXA-KNXXXAPKXXFPXX--PXPXXPXQXX 731
A P P G P P GAP K AP P P P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 732 XXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPP-PGXPPXXPPX 908
+ PP P P P P PP P+ P PP PP P PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Query: 909 XPPXXXXP 932
P P
Sbjct: 1230 PVPTAKAP 1237
Score = 38.3 bits (85), Expect = 0.002
Identities = 37/145 (25%), Positives = 39/145 (26%), Gaps = 5/145 (3%)
Frame = +3
Query: 561 AXGPPPPXXGQPXXXGXXGXRGDTPGXXGAPXA-KNXXXAPKXXFPXXPXPXXPXQXXXX 737
A P P G P P GAP K AP P P P
Sbjct: 1129 AAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV 1188
Query: 738 XXXXAKPPPXPPXETXXXPPP---XPPXXPP-XGPPTXXXTPXPPXXPXPPPGXPPXXPP 905
PP PP E P P PP PP PP + P P P PP P
Sbjct: 1189 ------PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Query: 906 XXPPXXXXPXXXXXKAPXXPTXPXP 980
+P P P
Sbjct: 1243 SSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 35.5 bits (78), Expect = 0.012
Identities = 28/107 (26%), Positives = 31/107 (28%), Gaps = 6/107 (5%)
Frame = +3
Query: 693 PXXPXPXX-PXQXXXXXXXXAKPPPXPP--XETXXXPPP--XPPXXPPXG-PPTXXXTPX 854
P P P P + PPP P E P P PP P G PP +
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 855 PPXXPXPPPGXPPXXPPXXPPXXXXPXXXXXKAPXXPTXPXPXXPXI 995
P P P PP P P P P P P +
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSV 1147
Score = 33.9 bits (74), Expect = 0.036
Identities = 22/84 (26%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = +3
Query: 750 AKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXX 929
A+ PP P + P P P P P P P PP P PP
Sbjct: 1009 ARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPA 1068
Query: 930 PXXXXXKAPXXP-TXPXPXXPXIP 998
P P P P IP
Sbjct: 1069 PSSEIPSIPAPSGAPPVPAPSGIP 1092
Score = 33.9 bits (74), Expect = 0.036
Identities = 26/108 (24%), Positives = 28/108 (25%), Gaps = 1/108 (0%)
Frame = +3
Query: 678 PKXXFPXXPXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXP 857
PK P P A PP P P P P P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 858 PXXPXPPPGXPPXXPP-XXPPXXXXPXXXXXKAPXXPTXPXPXXPXIP 998
P P PP P P +AP P P P +P
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP-KPSVGVPPVP 1211
Score = 32.7 bits (71), Expect = 0.083
Identities = 30/119 (25%), Positives = 33/119 (27%), Gaps = 1/119 (0%)
Frame = +3
Query: 645 GAPXAKNXXXAPKXXFPXXPXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXX-PP 821
GAP A AP P P P A P P P + P P P PP
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSG-----------APPVPAP---SGIPPVPKPSVAAPP 1103
Query: 822 XGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXXPXXXXXKAPXXPTXPXPXXPXIP 998
P+ P P PP P P P P P P +P
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 32.3 bits (70), Expect = 0.11
Identities = 23/86 (26%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 750 AKPPPXPPXETXXXPPPX--PPXXPPXG-PPTXXXTPXPPXXPXPPPGXPPXXPPXXPPX 920
A P P P + P P PP P PP + P P P P P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Query: 921 XXXPXXXXXKAPXXPTXPXPXXPXIP 998
P P P P P +P
Sbjct: 1081 GAPPVPAPSGIPPVP-KPSVAAPPVP 1105
Score = 29.1 bits (62), Expect = 1.0
Identities = 24/116 (20%), Positives = 26/116 (22%), Gaps = 1/116 (0%)
Frame = +3
Query: 651 PXAKNXXXAPKXXFPXXPXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGP 830
P K AP P P P P P + P PP P
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
Query: 831 PTXXXTPXPPXXPXPPPGXPP-XXPPXXPPXXXXPXXXXXKAPXXPTXPXPXXPXI 995
P P G PP P P P P P P +
Sbjct: 1073 IPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSV 1128
Score = 27.9 bits (59), Expect = 2.4
Identities = 22/86 (25%), Positives = 23/86 (26%), Gaps = 5/86 (5%)
Frame = +3
Query: 756 PPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXP----XPPPGXPPXXPPXXPPXX 923
PPP P P PP P P P P P P PP P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSA 1029
Query: 924 XXPXXXXXKAPXXPTXPXP-XXPXIP 998
P P P P P +P
Sbjct: 1030 DAPPIPVPST--APPVPIPTSTPPVP 1053
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.6 bits (98), Expect = 4e-05
Identities = 25/75 (33%), Positives = 25/75 (33%)
Frame = +3
Query: 756 PPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXXPX 935
PPP PP P P P PP P P PP P PP PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPP--PPPPPPPAVSAG 788
Query: 936 XXXXKAPXXPTXPXP 980
AP P P
Sbjct: 789 GSRYYAPAPQAEPEP 803
Score = 30.3 bits (65), Expect = 0.44
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +3
Query: 708 PXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPP 878
P P A P PP PPP PP PP PP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP------PPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +3
Query: 702 PXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPP 881
P P P P P P PPP PP P P PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP------PGVAGAGPPPP--PPPPP 783
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +3
Query: 702 PXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXP 875
P P P PPP PPP PP G + P P P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG--SRYYAPAPQAEPEP 803
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 40.3 bits (90), Expect = 4e-04
Identities = 23/49 (46%), Positives = 23/49 (46%)
Frame = -1
Query: 901 GXXGGXPGGGXGXXGGXGVXXXVGGPXGGXXGGXGGGXXXVSXGGXGGG 755
G GG GG G GG G GG GG GG GGG S GG GG
Sbjct: 138 GGRGGFRGGRGGSRGGFG-GNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 39.5 bits (88), Expect = 7e-04
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +3
Query: 750 AKPP--PXPPX-ETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPX 920
A PP P PP ++ PP P P PP+ P P P P P PP P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP--PPAQP-- 177
Query: 921 XXXPXXXXXKAPXXPTXPXPXXPXIP 998
P AP P+ P P +P
Sbjct: 178 -AAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 39.1 bits (87), Expect = 0.001
Identities = 26/81 (32%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Frame = +3
Query: 693 PXXPXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPP----XGPPTXXXTP--X 854
P P P P Q A P P P + PP P PP PP P
Sbjct: 125 PSAPAPPTP-QSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 855 PPXXPXPPPGXPPXXPPXXPP 917
PP P P PP P PP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
Score = 35.1 bits (77), Expect = 0.016
Identities = 27/101 (26%), Positives = 30/101 (29%), Gaps = 3/101 (2%)
Frame = +3
Query: 702 PXPXXPXQXXXXXXXXAKPPPXP---PXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPX 872
P P + A PP P P PPP P P PP+ P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS------APSLPS 192
Query: 873 PPPGXPPXXPPXXPPXXXXPXXXXXKAPXXPTXPXPXXPXI 995
P PP PP PP P P P P +
Sbjct: 193 AVPPMPPKVPP--PPLSQAPVANTSSRPSSFAPPAGHAPNV 231
Score = 34.7 bits (76), Expect = 0.021
Identities = 26/105 (24%), Positives = 29/105 (27%), Gaps = 3/105 (2%)
Frame = +3
Query: 693 PXXPXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPX 872
P P P + PPP P PP P P PP P PP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPA-APVKSPPSAPSLPSAVPPMPPKVPPPPLSQA 209
Query: 873 PPPGXPPXXPPXXPPXXXXP--XXXXXKAP-XXPTXPXPXXPXIP 998
P PP P K P P+ P P +P
Sbjct: 210 PVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVP 254
Score = 34.3 bits (75), Expect = 0.027
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 5/85 (5%)
Frame = +3
Query: 750 AKPPPXPPXE----TXXXP-PPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXP 914
A PP P E T P P PP P PP P P PPP P P
Sbjct: 127 APAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSS-LPPPAQPAAPVKSPP 185
Query: 915 PXXXXPXXXXXKAPXXPTXPXPXXP 989
P P P P P
Sbjct: 186 SAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 31.9 bits (69), Expect = 0.15
Identities = 21/83 (25%), Positives = 22/83 (26%)
Frame = +3
Query: 633 PGXXGAPXAKNXXXAPKXXFPXXPXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPX 812
P AP P P P P +K PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPS-IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 813 XPPXGPPTXXXTPXPPXXPXPPP 881
PP P P P PPP
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPP 205
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/56 (44%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -1
Query: 913 GXXGGXXGGXPG--GGXGXXGGXGVXXXVGGPXGGXXGGXGG-GXXXVSXGGXGGG 755
G GG GG G GG G GG G GG GG GG GG G GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGG-GRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 29.9 bits (64), Expect = 0.59
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 868 GXXGGXGVXXXVGGPXGGXXGGXGGGXXXVSXGGXGG 758
G GG G G G GG GGG GG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 29.5 bits (63), Expect = 0.78
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 883 PGGGXGXXGGXGVXXXVGGPXGGXXGGXGGGXXXVSXGGXGG 758
PG G G G G GG GG GG G GG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +3
Query: 750 AKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXP 914
A P PP PP P PP P PP P P G P PP P
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTP--PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 34.3 bits (75), Expect = 0.027
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = +3
Query: 768 PPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXXP 932
PP + PPP P PP PP+ PP PP PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPP--PPSA-----PPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 33.9 bits (74), Expect = 0.036
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 807 PXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXXPXXXXXKAPXXPTXPXPXX 986
P P PP + PP P P PP P PP P + P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVP--PPPSAPPMPAGPPSAPPPPLPASSA 1740
Query: 987 PXIP 998
P +P
Sbjct: 1741 PSVP 1744
Score = 33.1 bits (72), Expect = 0.063
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Frame = +3
Query: 792 PPPXPPXXPPXGPPTXXXTPXPPX----XPXPPPGXPPXXPPXXPPXXXXPXXXXXKAPX 959
P PP P P P PP P PPP PP P PP P AP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVP-PPPSAPPM--PAGPPSAPPPPLPASSAPS 1742
Query: 960 XP 965
P
Sbjct: 1743 VP 1744
Score = 33.1 bits (72), Expect = 0.063
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 756 PPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXP 890
P P PP + PP PP P GPP+ P PP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPM--PAGPPS---APPPPLPASSAPSVP 1744
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.5 bits (73), Expect = 0.048
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = -1
Query: 889 GXPGGGXGX-XGGXGVXXXVGGPXGGXXGGXGGGXXXVSXGGXGGGXAXXXXXXXXCXGX 713
G GGG G GG G G GG G G G GG GGG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 712 XGXGXXGXXXFG 677
G G FG
Sbjct: 244 PGGFGGGLGGFG 255
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 32.3 bits (70), Expect = 0.11
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 7/76 (9%)
Frame = +3
Query: 792 PPPXPPXXPPXGPPTXXXTPXPPXXPXPP-PGXP------PXXPPXXPPXXXXPXXXXXK 950
P P P P T PP P PP PG P PP PP P
Sbjct: 479 PSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAP 538
Query: 951 APXXPTXPXPXXPXIP 998
P P P P IP
Sbjct: 539 FPGYPA--VPAMPGIP 552
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Frame = +3
Query: 678 PKXXFPXXPXPXXPXQXXXXXXXXAKPP--PXPPXETXXXPPPXPPXXPPXGPPTXXXTP 851
P P P P PP P PP P PP PP
Sbjct: 474 PSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPP---GMA 530
Query: 852 XPPXXPXPPPGXP 890
PP P P PG P
Sbjct: 531 LPPGMPAPFPGYP 543
Score = 27.9 bits (59), Expect = 2.4
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = +3
Query: 693 PXXPXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPX 872
P P P P ++PP PP PP P P G P P P
Sbjct: 501 PGVPLPPIPGAPGMPNLNMSQPPMVPPG--MALPPGMPAPFP--GYPAVPAMPGIP-GAT 555
Query: 873 PPPGXP 890
PPG P
Sbjct: 556 APPGAP 561
Score = 26.2 bits (55), Expect = 7.2
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +3
Query: 762 PXPPXETXXXPP--PXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXXP 932
P PP T PP P PP G P + PP P P PP P P P
Sbjct: 492 PLPP--TTFAPPGVPLPPIPGAPGMPNLNMSQ-PPMVP-PGMALPPGMPAPFPGYPAVP 546
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.19
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 855 PPXXPXPPPGXPPXXPPXXPPXXXXP 932
PP P PPP P PP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.19
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +3
Query: 849 PXPPXXPXPPPG-XPPXXPPXXPP 917
P P P PPPG PP PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 31.1 bits (67), Expect = 0.25
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 804 PPXXPPXGPPTXXXTPXPPXXPXPPPG 884
PP PP PP P P PPPG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 759 PPXPPXETXXXPPPXPPXXPPXG 827
PP PP PP PP PP G
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.9 bits (59), Expect = 2.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 756 PPPXPPXETXXXPPPXPP 809
PPP P E PPP PP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 816 PPXGPPTXXXTPXPPXXPXPPPGXPPXXPP 905
PP PP P PP PP PP PP
Sbjct: 5 PPGNPPP----PPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 795 PPXPPXXPPXGPPTXXXTPXPP 860
PP PP P PP+ P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 756 PPPXPPXETXXXPPPXPPXXPP 821
PPP PP P PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.5 bits (63), Expect = 0.78
Identities = 31/126 (24%), Positives = 34/126 (26%), Gaps = 3/126 (2%)
Frame = +3
Query: 630 TPGXXGAPXAKNXXXAPKXXFPXXPXPXXPXQXXXXXXXXAKP--PPXPPXETXXXPPPX 803
TP P A AP P P + A P P P P
Sbjct: 511 TPSVPQPPAAPVVPEAPSVHQP--PAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVV 568
Query: 804 PPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXXPXXXXXKAPXXPTXP-XP 980
P PP P P P PP P P P AP P+ P P
Sbjct: 569 PEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPV-----APEVPSVPQRP 623
Query: 981 XXPXIP 998
P +P
Sbjct: 624 AVPVVP 629
Score = 26.6 bits (56), Expect = 5.5
Identities = 22/90 (24%), Positives = 23/90 (25%), Gaps = 1/90 (1%)
Frame = +3
Query: 708 PXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGP-PTXXXTPXPPXXPXPPPG 884
P P + A P PP P P P P P PP P P
Sbjct: 617 PSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEV 676
Query: 885 XPPXXPPXXPPXXXXPXXXXXKAPXXPTXP 974
PP P P P P P
Sbjct: 677 PSVPQPPAVP---VVPEAGQLNEPVVPPLP 703
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.5 bits (63), Expect = 0.78
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 11/67 (16%)
Frame = +3
Query: 750 AKPPPXPPXETXXXPPP-------XPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXP-- 902
A PPP PP PP PP PP G P P P P G P
Sbjct: 1880 AAPPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMP-APVPLTGKETAVPLS 1938
Query: 903 --PXXPP 917
P PP
Sbjct: 1939 SMPNAPP 1945
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 1.0
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = +3
Query: 756 PPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXP--PXXPXPPPGXPPXXPPXXPP 917
PPP P E P G P P P P PP PP PP
Sbjct: 193 PPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 29.1 bits (62), Expect = 1.0
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 11/64 (17%)
Frame = +3
Query: 756 PPPXPPXETXXXPPPXPPXXPPXGPPTXXXT---PXP--------PXXPXPPPGXPPXXP 902
PP P + P P PP PP PP T P P PPP P P
Sbjct: 224 PPTYTPKQADPLPAPPPP-PPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
Query: 903 PXXP 914
P P
Sbjct: 283 PRPP 286
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -1
Query: 892 GGXPGGGXGXXGGXGVXXXVGGPXG--GXXGGXGGGXXXVSXGGXGGGXA 749
GG GGG G GG + G G GG GG + GG G A
Sbjct: 136 GGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHA 185
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 913 GXXGGXXGGXPGGGXGXXGGXGVXXXVGGPXG 818
G G GG PG G G G +GGP G
Sbjct: 83 GGPGAGFGGFPGAGPG--GARTFHFNMGGPGG 112
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/80 (23%), Positives = 21/80 (26%)
Frame = +3
Query: 759 PPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXPPXXXXPXX 938
PP PP + P PP P PP P P P P
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVA 967
Query: 939 XXXKAPXXPTXPXPXXPXIP 998
+ P P P P P
Sbjct: 968 AASRISSSPNMP-PSNPYTP 986
Score = 25.8 bits (54), Expect = 9.5
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +3
Query: 702 PXPXXPXQXXXXXXXXAKPPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPP 878
P P A PPP ET P PP P+ P P P P
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPS-HPNPYTPVAPQSP 965
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 916 GGXXGGXXGGXPGGGXGXXGG 854
GG GG GG PGG G G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPG 632
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 795 PPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPPXXP 914
P P P PPT TP P PPP P P
Sbjct: 721 PAIKPQVTP-APPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 832 GGPXGGXXGGXGGGXXXVSXGGXGGG 755
GG G GG GG GG GGG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG 471
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 25.8 bits (54), Expect = 9.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 756 PPPXPPXETXXXPPPXPPXXPPXGPPTXXXTPXPPXXPXPPPGXPPXXPP 905
PP P T P P P G P P P P PP PP
Sbjct: 140 PPLYHPAATA--PSEFMPSIPGFGNLPNPAMPPIPFLPFNPAAQPPFPPP 187
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.140 0.473
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,317,452
Number of Sequences: 5004
Number of extensions: 16218
Number of successful extensions: 425
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 517271174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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