Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_H06
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72509-6|CAA96650.1|  223|Caenorhabditis elegans Hypothetical pr...   104   1e-22
Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical pr...    29   3.4  
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend...    29   3.4  
AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transpo...    29   3.4  
AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transpor...    29   3.4  
AL132904-5|CAC35837.2|  406|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z72509-6|CAA96650.1|  223|Caenorhabditis elegans Hypothetical
           protein F32G8.6 protein.
          Length = 223

 Score =  104 bits (249), Expect = 1e-22
 Identities = 48/75 (64%), Positives = 59/75 (78%)
 Frame = +3

Query: 504 REALLPDMANSYRLLLTGLGEDPERAGLLKTPERAAKAMLFFTKGYDQSLEEVLNNAIFD 683
           +E  L  M N+Y+ ++  +GED  R GLLKTPERAAKAM+ FTKGYD  L+E+LN A+FD
Sbjct: 36  KEDHLKSMCNAYQSIIQHVGEDINRQGLLKTPERAAKAMMAFTKGYDDQLDELLNEAVFD 95

Query: 684 EDTDEMVVVKDIEMF 728
           ED DEMV+VKDIEMF
Sbjct: 96  EDHDEMVIVKDIEMF 110


>Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical
           protein F52B5.1 protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 291 EEKENGDAPQKGSFVGKYKKAPEALKSFNLADAESEL-EVPGTPMTPRTSTTP 446
           + K+NG   +KG F+   +   +  KSF+     S++ E P  P+T +T+  P
Sbjct: 148 QAKKNGAGGEKGGFLSTVRSISDIGKSFSHGKNLSKIEEKPEGPVTSQTAGAP 200


>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
           chloride bicarbonateanion exchanger alternative variant
           a protein.
          Length = 1161

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 291 EEKENGDAPQKGSFVGKYKKAPEALKSFNLADAESEL-EVPGTPMTPRTSTTP 446
           + K+NG   +KG F+   +   +  KSF+     S++ E P  P+T +T+  P
Sbjct: 190 QAKKNGAGGEKGGFLSTVRSISDIGKSFSHGKNLSKIEEKPEGPVTSQTAGAP 242


>AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion
           transporter ABTS-1 protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 291 EEKENGDAPQKGSFVGKYKKAPEALKSFNLADAESEL-EVPGTPMTPRTSTTP 446
           + K+NG   +KG F+   +   +  KSF+     S++ E P  P+T +T+  P
Sbjct: 148 QAKKNGAGGEKGGFLSTVRSISDIGKSFSHGKNLSKIEEKPEGPVTSQTAGAP 200


>AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transporter
           protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 291 EEKENGDAPQKGSFVGKYKKAPEALKSFNLADAESEL-EVPGTPMTPRTSTTP 446
           + K+NG   +KG F+   +   +  KSF+     S++ E P  P+T +T+  P
Sbjct: 148 QAKKNGAGGEKGGFLSTVRSISDIGKSFSHGKNLSKIEEKPEGPVTSQTAGAP 200


>AL132904-5|CAC35837.2|  406|Caenorhabditis elegans Hypothetical
           protein Y111B2A.9a protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -3

Query: 522 PVTTPPWWAVCGPIPGHGGRCSSRDQAW----SKSSAS*AFQALQVHFPHRPS*SSS 364
           PV +PP    CG I G+  R  S  +A      +SS S     L V FP  PS SS+
Sbjct: 106 PVCSPPPEVFCGSIVGNQMRNRSNSEAQPGLRMRSSHSLGNGGLLVFFPTSPSSSSN 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,978,715
Number of Sequences: 27780
Number of extensions: 355458
Number of successful extensions: 862
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)