Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_H04
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 78 7e-15
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 37 0.016
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 32 0.62
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 32 0.62
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 31 1.1
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 31 1.4
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 30 1.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 30 2.5
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 3.3
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 29 3.3
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 5.7
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 29 5.7
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 5.7
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 28 7.6
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 28 7.6
AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear recep... 28 7.6
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 7.6
AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical ... 28 7.6
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 7.6
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 28 7.6
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 78.2 bits (184), Expect = 7e-15
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +3
Query: 246 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 422
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 423 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLP 581
++L T +EK LP D + EK H L D + +F +K T T EKN LP
Sbjct: 60 TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLP 112
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/91 (42%), Positives = 48/91 (52%)
Frame = +3
Query: 288 QLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLP 467
++E F+++ L EKIVLPSA+D+ EK L D I F S LK TET EKN LP
Sbjct: 53 EIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLP 112
Query: 468 DKDVVAAEKAHQNLLDGVEHFDKTQMKHTTT 560
VA EK L FDK+ + H T
Sbjct: 113 SPTDVAREKT----LQMAASFDKSALHHVET 139
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 243 PSLKDLP--KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKF 416
PS D+ K +L ++ F + L+ +T EK VLPS DVA EKT + F
Sbjct: 74 PSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKTLQM----AASF 129
Query: 417 DSSQLKHTET 446
D S L H ET
Sbjct: 130 DKSALHHVET 139
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 625 LNGIENFDPTKLKHTETCEKNPLPTKDVIEQEK 723
++ IE+FD TKL T EK LP+ D I+QEK
Sbjct: 51 IHEIEHFDSTKLHSTPVKEKIVLPSADDIKQEK 83
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 634 IENFDPTKLKHTETCEKNPLPTKDVIEQEKS 726
I NF LK TET EKN LP+ + +EK+
Sbjct: 92 INNFPSENLKKTETIEKNVLPSPTDVAREKT 122
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 655 KLKHTETCEKNPLPTKDVIEQEK 723
+LK ET EKN LPTK+ + +EK
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEK 45
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 37.1 bits (82), Expect = 0.016
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Frame = +1
Query: 61 STRLPRPHPRL*AVL*RPPALSPALSVFSRSPTESLSARIFY----PLPHQ-----KYID 213
S LP PHP + + PP +P + +PT SLS+ I PL HQ K ++
Sbjct: 59 SPALPAPHPGIPSSSYHPPVSTPTPTA---APTTSLSSTIVRNMTAPLLHQNQKPPKNLN 115
Query: 214 SQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFR 354
S+ P+ T T R+PQ + ++++TP VS S+ + FR
Sbjct: 116 SR-PSTPQTSSNLNTPKRTPQVKNLQAESTTPTVSRPSSEVDLTSFR 161
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +3
Query: 69 ITTSAPPAVSCAVTPARTLARALSIQSQSDRVAECTNLLSPSSSKIY*FTMACSVSDTPS 248
I TS P S VT T + +S+ S + V +++LS SSS CS+ ++ S
Sbjct: 697 IPTSPPSCHSSHVTSNSTHSTHISV-SFPNTVTSASSILSNSSSPHQPTPSLCSLPESSS 755
Query: 249 LKDLPKVATDLKS 287
L +P T L +
Sbjct: 756 LHSIPTAMTSLST 768
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +3
Query: 69 ITTSAPPAVSCAVTPARTLARALSIQSQSDRVAECTNLLSPSSSKIY*FTMACSVSDTPS 248
I TS P S VT T + +S+ S + V +++LS SSS CS+ ++ S
Sbjct: 697 IPTSPPSCHSSHVTSNSTHSTHISV-SFPNTVTSASSILSNSSSPHQPTPSLCSLPESSS 755
Query: 249 LKDLPKVATDLKS 287
L +P T L +
Sbjct: 756 LHSIPTAMTSLST 768
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +1
Query: 124 SPALSVFSRSPTESLSARIFY----PLPHQ-----KYIDSQWPAP*VTLPP*KTSPRSPQ 276
SPAL +PT SLS+ I PL HQ K ++S+ P+ T T R+PQ
Sbjct: 59 SPALPAPHPAPTTSLSSTIVRNMTAPLLHQNQKPPKNLNSR-PSTPQTSSNLNTPKRTPQ 117
Query: 277 T*RVSSKASTPAVSVTSTPMKRLCFR 354
+ ++++TP VS S+ + FR
Sbjct: 118 VKNLQAESTTPTVSRPSSEVDLTSFR 143
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +3
Query: 552 TTTEEKNPLPPNRSYRSGEGKEQIPERHRELRSH*AEAHGNVRKEPAPHKGRH*AREISL 731
TTT P G+ + Q P+ + RS + G++ P P A EI L
Sbjct: 303 TTTSFNGPFFRLEQVNPGQNQPQQPQYQQHPRSQSVDPSGDMNGGPRPIHQNFSASEIEL 362
Query: 732 NHY 740
+HY
Sbjct: 363 HHY 365
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 375 EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNL-LDGVEHFDKTQMKH 551
+K +++ D + D + KH ETQ+K ++ A EKA ++ + + + + K
Sbjct: 189 KKAEQNAQDNQKYHDEERKKHIETQKKAEENEEKRRAKEKADRDAHVARHKQAEALEKKK 248
Query: 552 TTTEEKNPLPPNRSYRSGEGKEQIPERHRE 641
EEK E +E I ERHR+
Sbjct: 249 REQEEKQKNEDRERATQKERREHI-ERHRQ 277
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 431 EAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPE 586
E + E+ + R E PEPL R D DE DDG ++ + E
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDEDGDSME 2544
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 486 LRQRLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 361
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 486 LRQRLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 361
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.3
Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 8/154 (5%)
Frame = +3
Query: 261 PKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKS------LFDGIEKFDS 422
PK + +K +E + + +K P E+ EK++KS + ++ D
Sbjct: 39 PKADSKMKPPVENVKSKKSEKKEEPKKEEEPKKEEEKKEKSKKSEKKDDKKEEAKKEDDK 98
Query: 423 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFD--KTQMKHTTTEEKNPLPPNRSY 596
K E +E KD EK + D E D K K
Sbjct: 99 KDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEK 158
Query: 597 RSGEGKEQIPERHRELRSH*AEAHGNVRKEPAPH 698
+ E KE+ E +E + + ++EP PH
Sbjct: 159 KEEEKKEEKKEEKKEEKKEDEKKEDEKKEEPKPH 192
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 540 QMKHT--TTEEKNPLPPNRSYRSGEGKEQIPERHRELRSH*AEAH 668
Q +HT T P+PP + RSGEG +R R+ R H +H
Sbjct: 102 QARHTNQTVVAGIPVPPEKPERSGEG-SSTEQRDRDHRQHRPTSH 145
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +3
Query: 360 EDVATEKTQKSLFDGIEKFDSSQLKHTETQE---KNPLPDKDVVAAEKAHQNLLDGVEHF 530
E+ EK +KS D E+ + + T+T++ KN K+ +K + + E
Sbjct: 102 ENENDEKKEKSKDDKKEESKEDKKEKTKTEDNEGKNEEKKKEKKEEKKDEKEKKEKTED- 160
Query: 531 DKTQMKHTTTEEKNPLPPNRSYRSG 605
DK + K T EEK P + +SG
Sbjct: 161 DKEKEKEKTKEEKVKEDPKKDDKSG 185
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 723 ISLNHYFITVTRKCISLVSPYLILM*VRSICVVHYKFIXVLYNGTL 860
+ +N Y + + R C++ +PY + + +S V+HY+ + NG +
Sbjct: 374 LHVNDYSVCIKRNCLNQKAPYSVNL--KSKHVLHYRLVICDSNGQI 417
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/117 (21%), Positives = 45/117 (38%)
Frame = +3
Query: 351 PSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHF 530
P V+ E+ +K + +E+ + +++ E+ L +KD +A EK E
Sbjct: 82 PKTPKVSREEREKQKREKMEEREKQRIERERILEEKRL-EKDKLAEEKRLDKEKKEKERL 140
Query: 531 DKTQMKHTTTEEKNPLPPNRSYRSGEGKEQIPERHRELRSH*AEAHGNVRKEPAPHK 701
DK + EEK + + E K + E + + E R+E K
Sbjct: 141 DKKLEEDKKKEEKRKEAEEKKKKDEEEKMKKDEERNKRKKEEEEKKEAKRREDEEKK 197
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 447 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 325
+S A + + C R K + +S R L EA F+WCR
Sbjct: 172 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 212
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +3
Query: 420 SSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLPPNRSYR 599
SS KH +E+ +K+ AEK + DG +K + K ++K+ R+ R
Sbjct: 426 SSSSKHETKEERKARKEKERERAEKKAKKEKDGHREEEKPKKK----DKKHETEEERAER 481
Query: 600 SGEGKEQIPERHRELRSH 653
+ K++ + R+ + H
Sbjct: 482 KRKEKKEKERQERKEKEH 499
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +3
Query: 354 SAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFD 533
S K + L +E S H + ++KN D ++ E Q L+G F+
Sbjct: 367 SCNSTIEHKEAEELISHLELESSQNSIHNDNRKKNEDYDMEISEIETITQRQLEGYGTFN 426
Query: 534 KTQMKH 551
+MK+
Sbjct: 427 SPEMKN 432
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 447 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 325
+S A + + C R K + +S R L EA F+WCR
Sbjct: 172 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 212
>AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 353
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 447 ESRCASAGSNQTSQCRRIKTSGSSQWRRLQQTEAQSFHWCR 325
+S A + + C R K + +S R L EA F+WCR
Sbjct: 88 DSEVLQAIKDPSQVCARTKINWNSHSRPLITIEALRFNWCR 128
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 369 ATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMK 548
A +K + +G+EK + + K E +EK ++ EKA + G FD + +
Sbjct: 269 ARKKLPAWILEGLEKAEREKQKQWEKEEKLKKAEE-----EKARRRAEAGKSKFDSSSDE 323
Query: 549 HTTTEEKNPLPPNRS-YR--SGEGKEQIPERHRE 641
+ EK P+ +S Y+ + ++ + ER +
Sbjct: 324 ESPENEKFPVGNGKSEYQEDDNDSEDDLEERREQ 357
>AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical
protein Y67A10A.9 protein.
Length = 734
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 72 TTSAPPAVSCAVTPARTLARALSIQSQSDR 161
T +AP AV+C V P + L AL Q+ R
Sbjct: 364 TQTAPAAVACPVPPGKPLKSALKTPQQTRR 393
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +1
Query: 67 RLPRPHPRL*AVL*RPPALSPALSVFSRSPTES-LSARIFYPLPHQKYIDSQWPAP*VTL 243
RLP P P L P +L++ + SP ES + P P + P P
Sbjct: 495 RLPSPKPVTPEPLPSPTITDVSLAIATPSPEESDDDQELILPSPEPSPVREPTPPP---- 550
Query: 244 PP*KTSPRSP 273
PP + +PR P
Sbjct: 551 PPREPTPREP 560
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 181 FYPLPHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLL 360
F P+P + + + P TSP+SP + S++ P VSVTS P ++
Sbjct: 19 FSPIPKFSRLRTPRTSREYVCPLKSTSPQSPSS---STENEPPPVSVTSPPARKRALEES 75
Query: 361 KTSPLRR 381
+P+++
Sbjct: 76 TVTPIQQ 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,144,214
Number of Sequences: 27780
Number of extensions: 407364
Number of successful extensions: 1429
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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