Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_H02
(917 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0074 - 16233681-16233981,16234258-16234670,16235240-16235440 32 0.73
03_03_0094 + 14378953-14380728 32 0.73
11_06_0289 - 21969248-21973516 31 1.7
08_01_0027 - 195321-195932,197206-197415 30 2.2
03_01_0186 + 1491202-1491210,1491401-1491476,1491573-1492075 30 3.0
01_01_0120 + 1119319-1119447,1120565-1120632,1121682-1121928,112... 30 3.0
12_02_0643 - 21461123-21461902 29 3.9
09_02_0343 + 7514514-7514948 29 3.9
09_02_0136 + 4747985-4748419 29 5.2
07_03_0131 - 14004278-14004712 29 5.2
06_03_0218 + 18219956-18220555 29 5.2
03_03_0245 + 15782712-15783066,15783385-15783611 29 5.2
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 29 6.8
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 6.8
06_01_1104 + 9097108-9097779 28 9.0
03_06_0275 + 32806682-32807197,32808118-32808198,32808293-328085... 28 9.0
>06_03_0074 - 16233681-16233981,16234258-16234670,16235240-16235440
Length = 304
Score = 31.9 bits (69), Expect = 0.73
Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -2
Query: 217 PGEATTR-RGTEAESXGXRKDREGETXEKKRDARGPTEHGTQGRKDGRPRXKEG---XGX 50
P EAT+R + TEA S G GE + KR A GTQG G R E G
Sbjct: 18 PREATSRAQATEAASDGSGSGASGEGGKPKRRAWEQIGLGTQGIVLGNTRLAEARREGGA 77
Query: 49 QSXKGGPSREAGR 11
+ GG +A R
Sbjct: 78 ATAAGGGGVQARR 90
>03_03_0094 + 14378953-14380728
Length = 591
Score = 31.9 bits (69), Expect = 0.73
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = -3
Query: 321 NVTATRAPRDSRPXKPADRFAGKXCQQXXKXCGRRQEKRRRDGEPKPKAVDXERTGKEKX 142
+++A+ + + + + AD G+ ++ K + E DGE K + D E+ G EK
Sbjct: 496 DLSASVSAKKIKVEEEADAVEGEKSEKKKKKKKDKAESAYADGEVKAELSDGEKGGSEKK 555
Query: 141 WKKRETQ 121
KK++++
Sbjct: 556 KKKKKSK 562
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -2
Query: 211 EATTRRGTEAESXGXRKDREGETXEKKRDARGPTEHGTQGRKDGRPRXKEGXGXQSXKGG 32
E R+G E KD G+ E+ ++ R E G + RK+ + +E G + +
Sbjct: 433 ETAVRQGGGGEREEDEKDERGDGEEEGKEERRDMEKGGEERKEQQQEEQEKEGRKEEQNE 492
Query: 31 PSREA-GRE 8
+E GR+
Sbjct: 493 VRKETEGRK 501
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 339 LLQAHKLVLSVCSPYFQXMF 398
+L+AHK +L+ CSP F+ MF
Sbjct: 118 VLKAHKAILASCSPVFESMF 137
>03_01_0186 + 1491202-1491210,1491401-1491476,1491573-1492075
Length = 195
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 163 KDREGETXEKKRDARGPTEHGTQGRKDGRPRXKEGXGXQSXKGGPSRE 20
K +EG KK G E G G+K+G KEG G + +++
Sbjct: 77 KKKEGGGDAKKDGGDGKKEGGGDGKKEGGDGKKEGDGKKGEAAAAAKK 124
>01_01_0120 +
1119319-1119447,1120565-1120632,1121682-1121928,
1122430-1122498,1122782-1122907,1123326-1123406,
1123484-1123561,1124084-1124319,1124399-1124545,
1124864-1125152,1125231-1125352,1125713-1125749
Length = 542
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 151 GETXEKKRDARGPTEHGTQGRKDGRPRXKEG 59
G +R ++GP E G G DG PR +G
Sbjct: 83 GRRRRHRRGSKGPYERGGDGEVDGSPREAKG 113
>12_02_0643 - 21461123-21461902
Length = 259
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 345 AITCLSAANVTATRAPRDSRPXKPADRFAGKXCQQXXKXCGR 220
A L+ A++T+ PR SR R G C Q + CG+
Sbjct: 110 AALLLAVADITSCGLPRSSRSRGGGRRQGGGLCSQPGRFCGQ 151
>09_02_0343 + 7514514-7514948
Length = 144
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = -2
Query: 220 TPGEATTRRGTEA----ESXGXRKDRE-GETXEKKRDARGPTEHGTQGRKDGRPRXKEGX 56
T +A +R EA E G R++R G K+R +RG H G DG + G
Sbjct: 51 TGAQAGRQRRLEAAGAEEREGRRRERSSGGLRGKRRASRGRRGHCDAGGGDGATGWRSGE 110
Query: 55 GXQSXKGGPSREAGRE 8
++ GG R GRE
Sbjct: 111 EGEAAGGG--RRHGRE 124
>09_02_0136 + 4747985-4748419
Length = 144
Score = 29.1 bits (62), Expect = 5.2
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = -2
Query: 220 TPGEATTRRGTEA----ESXGXRKDRE-GETXEKKRDARGPTEHGTQGRKDGRPRXKEGX 56
T +A +R EA E G R++R G K+R +RG H G DG + G
Sbjct: 51 TGAQAGRQRRLEAAGAEEREGRRRERSSGGLRGKRRASRGRGGHCDAGGGDGATGRRSGE 110
Query: 55 GXQSXKGGPSREAGRE 8
++ GG R GRE
Sbjct: 111 EGEAAGGG--RRHGRE 124
>07_03_0131 - 14004278-14004712
Length = 144
Score = 29.1 bits (62), Expect = 5.2
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = -2
Query: 220 TPGEATTRRGTEA----ESXGXRKDRE-GETXEKKRDARGPTEHGTQGRKDGRPRXKEGX 56
T +A +R EA E G R++R G K+R +RG H G DG + G
Sbjct: 51 TGAQAGRQRRLEAAGAEEREGRRRERSSGGLRGKRRASRGRGGHCDAGGGDGATGRRSGE 110
Query: 55 GXQSXKGGPSREAGRE 8
++ GG R GRE
Sbjct: 111 EGEAAGGG--RRHGRE 124
>06_03_0218 + 18219956-18220555
Length = 199
Score = 29.1 bits (62), Expect = 5.2
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Frame = -2
Query: 259 GEXVPAXXKXVRPTPGEATTRRGTEAESXGXRKDREGETXE--------KKRDARGPTEH 104
GE V A + P A RR E+ G K REG K+R +RG
Sbjct: 87 GEEVAARPREKTARPDGARARRERRLEAAGAEK-REGRRRGGSSGGLRGKRRASRGGGGG 145
Query: 103 GTQGRKDGRPRXKEGXGXQSXKGGPSREAGRE 8
G G DG + Q+ GG R+ GRE
Sbjct: 146 GDAGGGDGAAGRRTVEAAQAAGGG--RQRGRE 175
>03_03_0245 + 15782712-15783066,15783385-15783611
Length = 193
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 229 VRPTPGEATTRRGTEAESXGXRKDREGETXEKKRDARGPTEHGTQGR 89
+RP E R+ + G R+DR G T + DARG GR
Sbjct: 39 IRPAMAERD-RKTRPGVAEGDRRDRRGSTMDGAPDARGERGSAVAGR 84
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 333 GRLLQAHKLVLSVCSPYFQXMFK--MNPTQHPIVFLKDVSHSALXELI 470
G + AHKL+LS+ S F MF M + VF +DV A LI
Sbjct: 360 GLVTHAHKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLI 407
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 181 ESXGXRKDREGETXEKKRDARGPTEHGTQGRKDGRPRXKEGXGXQSXKGGPSREA 17
++ G RKD + + EK RD+ E G ++D + +G S + S A
Sbjct: 721 DAKGERKDYQKDVREKSRDSADRREKGKHEKEDRSRQTTKGSSSHSSRRSRSPSA 775
>06_01_1104 + 9097108-9097779
Length = 223
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -2
Query: 208 ATTRRGTEAESXGXRKDREGETXEKKRDA-RGPTEHGTQGRKDGRPRXKEGXGXQSXKG 35
A TRRG E G D + E+ R G++ R+DGRP + G + G
Sbjct: 57 AETRRGA-VERRGLVADEAADAAERTGGGGRSGAGRGSRRRRDGRPWRRRGGAEREAAG 114
>03_06_0275 +
32806682-32807197,32808118-32808198,32808293-32808568,
32808670-32809182
Length = 461
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 166 RKDREGETXEKKRDARGPTEHGTQGRKDGR 77
R++RE E ++ + +G EHG +G K R
Sbjct: 331 RREREREHGRRREEEQGEEEHGERGEKARR 360
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,827,485
Number of Sequences: 37544
Number of extensions: 262099
Number of successful extensions: 898
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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