Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_G23
(885 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE006464-6|AAK61238.1| 266|Homo sapiens unknown protein. 69 3e-11
BC047118-1|AAH47118.1| 147|Homo sapiens C16orf13 protein protein. 59 2e-08
BC007207-1|AAH07207.1| 107|Homo sapiens hypothetical protein MG... 59 2e-08
AK057077-1|BAB71362.1| 147|Homo sapiens protein ( Homo sapiens ... 59 2e-08
BX537987-1|CAD97947.1| 323|Homo sapiens hypothetical protein pr... 34 0.60
BC109260-1|AAI09261.1| 403|Homo sapiens tripartite motif-contai... 34 0.60
BC109259-1|AAI09260.1| 403|Homo sapiens tripartite motif-contai... 34 0.60
AY159379-1|AAN86853.1| 403|Homo sapiens tumor suppressor TSBF1 ... 34 0.60
U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein. 30 9.7
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein. 30 9.7
AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein. 30 9.7
>AE006464-6|AAK61238.1| 266|Homo sapiens unknown protein.
Length = 266
Score = 68.5 bits (160), Expect = 3e-11
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +1
Query: 571 NILLPIQLDICTDLVHYG-FLEESIDYVYNANMIHLSPYECTIGLFKNAGCYLKPNALMI 747
N+ P+ LD+ H+G L +S+D + NM H+SP CT GLF+ AG LKP AL+I
Sbjct: 140 NVKAPLHLDVTWGWEHWGGILPQSLDLLLCINMAHVSPLRCTEGLFRAAGHLLKPRALLI 199
Query: 748 LYGPFSKDGVI--HLTVMFNLM 807
YGP++ +G I V F+LM
Sbjct: 200 TYGPYAINGKISPQSNVDFDLM 221
Score = 58.8 bits (136), Expect = 2e-08
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +1
Query: 334 LIYPAATRNQEPILQVLKRFVTYDCAEDDSPLFLEVASGSGQHLAHFAPHFPNIKFQPTE 513
L+ AA RN++PIL VL++++ D A+ + LEVASGSGQH AHFA FP ++QP++
Sbjct: 2 LVAAAAERNKDPILHVLRQYL--DPAQRGVRV-LEVASGSGQHAAHFARAFPLAEWQPSD 58
Query: 514 FDETLL 531
D+ L
Sbjct: 59 VDQRCL 64
>BC047118-1|AAH47118.1| 147|Homo sapiens C16orf13 protein protein.
Length = 147
Score = 58.8 bits (136), Expect = 2e-08
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +1
Query: 334 LIYPAATRNQEPILQVLKRFVTYDCAEDDSPLFLEVASGSGQHLAHFAPHFPNIKFQPTE 513
L+ AA RN++PIL VL++++ D A+ + LEVASGSGQH AHFA FP ++QP++
Sbjct: 2 LVAAAAERNKDPILHVLRQYL--DPAQRGVRV-LEVASGSGQHAAHFARAFPLAEWQPSD 58
Query: 514 FDETLL 531
D+ L
Sbjct: 59 VDQRCL 64
>BC007207-1|AAH07207.1| 107|Homo sapiens hypothetical protein
MGC13114 protein.
Length = 107
Score = 58.8 bits (136), Expect = 2e-08
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +1
Query: 334 LIYPAATRNQEPILQVLKRFVTYDCAEDDSPLFLEVASGSGQHLAHFAPHFPNIKFQPTE 513
L+ AA RN++PIL VL++++ D A+ + LEVASGSGQH AHFA FP ++QP++
Sbjct: 2 LVAAAAERNKDPILHVLRQYL--DPAQRGVRV-LEVASGSGQHAAHFARAFPLAEWQPSD 58
Query: 514 FDETLL 531
D+ L
Sbjct: 59 VDQRCL 64
>AK057077-1|BAB71362.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ32515 fis, clone SMINT1000100. ).
Length = 147
Score = 58.8 bits (136), Expect = 2e-08
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +1
Query: 334 LIYPAATRNQEPILQVLKRFVTYDCAEDDSPLFLEVASGSGQHLAHFAPHFPNIKFQPTE 513
L+ AA RN++PIL VL++++ D A+ + LEVASGSGQH AHFA FP ++QP++
Sbjct: 2 LVAAAAERNKDPILHVLRQYL--DPAQRGVRV-LEVASGSGQHAAHFARAFPLAEWQPSD 58
Query: 514 FDETLL 531
D+ L
Sbjct: 59 VDQRCL 64
>BX537987-1|CAD97947.1| 323|Homo sapiens hypothetical protein
protein.
Length = 323
Score = 34.3 bits (75), Expect = 0.60
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Frame = +1
Query: 238 LNYYKFLNNWSMSKLKDFSCAFHGNENMANQKLIYPAATRNQEPILQVLKRFVTYDCAED 417
L Y+K LN+ K K F A N+ NQ+ P R +E Q L+ ++
Sbjct: 186 LQYFKELNDTLEQKKKSFLTALCDVGNLINQEYT-PQIERMKEIREQQLELMALTISLQE 244
Query: 418 DSPL-FLEVASGSGQHLAHFAPHFPNIKFQPTEFDETLLGSIK--YYATEC-PTKNILLP 585
+SPL FLE QH+ P + QP E + +K + TE KN+L+P
Sbjct: 245 ESPLKFLEKVDDVRQHV-QILKQGPLPEVQPVEIYPRVSKILKEEWSRTEIGQIKNVLIP 303
>BC109260-1|AAI09261.1| 403|Homo sapiens tripartite
motif-containing 59 protein.
Length = 403
Score = 34.3 bits (75), Expect = 0.60
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Frame = +1
Query: 238 LNYYKFLNNWSMSKLKDFSCAFHGNENMANQKLIYPAATRNQEPILQVLKRFVTYDCAED 417
L Y+K LN+ K K F A N+ NQ+ P R +E Q L+ ++
Sbjct: 186 LQYFKELNDTLEQKKKSFLTALCDVGNLINQEYT-PQIERMKEIREQQLELMALTISLQE 244
Query: 418 DSPL-FLEVASGSGQHLAHFAPHFPNIKFQPTEFDETLLGSIK--YYATEC-PTKNILLP 585
+SPL FLE QH+ P + QP E + +K + TE KN+L+P
Sbjct: 245 ESPLKFLEKVDDVRQHV-QILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIKNVLIP 303
>BC109259-1|AAI09260.1| 403|Homo sapiens tripartite
motif-containing 59 protein.
Length = 403
Score = 34.3 bits (75), Expect = 0.60
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Frame = +1
Query: 238 LNYYKFLNNWSMSKLKDFSCAFHGNENMANQKLIYPAATRNQEPILQVLKRFVTYDCAED 417
L Y+K LN+ K K F A N+ NQ+ P R +E Q L+ ++
Sbjct: 186 LQYFKELNDTLEQKKKSFLTALCDVGNLINQEYT-PQIERMKEIREQQLELMALTISLQE 244
Query: 418 DSPL-FLEVASGSGQHLAHFAPHFPNIKFQPTEFDETLLGSIK--YYATEC-PTKNILLP 585
+SPL FLE QH+ P + QP E + +K + TE KN+L+P
Sbjct: 245 ESPLKFLEKVDDVRQHV-QILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIKNVLIP 303
>AY159379-1|AAN86853.1| 403|Homo sapiens tumor suppressor TSBF1
protein.
Length = 403
Score = 34.3 bits (75), Expect = 0.60
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Frame = +1
Query: 238 LNYYKFLNNWSMSKLKDFSCAFHGNENMANQKLIYPAATRNQEPILQVLKRFVTYDCAED 417
L Y+K LN+ K K F A N+ NQ+ P R +E Q L+ ++
Sbjct: 186 LQYFKELNDTLEQKKKSFLTALCDVGNLINQEYT-PQIERMKEIREQQLELMALTISLQE 244
Query: 418 DSPL-FLEVASGSGQHLAHFAPHFPNIKFQPTEFDETLLGSIK--YYATEC-PTKNILLP 585
+SPL FLE QH+ P + QP E + +K + TE KN+L+P
Sbjct: 245 ESPLKFLEKVDDVRQHV-QILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIKNVLIP 303
>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 313 ENMANQKLIYPAATRNQEPILQVLKRFVTYDC--AEDDSPLFLEVASGSGQHLAHFAPHF 486
+ + L + AA N E L +LK D +++++PLFL GS + HF
Sbjct: 1936 DELGKSALHWAAAVNNVEATLALLKNGANKDMQDSKEETPLFLAAREGSYEAAKLLLDHF 1995
Query: 487 PN 492
N
Sbjct: 1996 AN 1997
>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 313 ENMANQKLIYPAATRNQEPILQVLKRFVTYDC--AEDDSPLFLEVASGSGQHLAHFAPHF 486
+ + L + AA N E L +LK D +++++PLFL GS + HF
Sbjct: 1936 DELGKSALHWAAAVNNVEATLALLKNGANKDMQDSKEETPLFLAAREGSYEAAKLLLDHF 1995
Query: 487 PN 492
N
Sbjct: 1996 AN 1997
>AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.
Length = 2281
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 313 ENMANQKLIYPAATRNQEPILQVLKRFVTYDC--AEDDSPLFLEVASGSGQHLAHFAPHF 486
+ + L + AA N E L +LK D +++++PLFL GS + HF
Sbjct: 1896 DELGKSALHWAAAVNNVEATLALLKNGANKDMQDSKEETPLFLAAREGSYEAAKLLLDHF 1955
Query: 487 PN 492
N
Sbjct: 1956 AN 1957
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,041,324
Number of Sequences: 237096
Number of extensions: 2210106
Number of successful extensions: 3998
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3993
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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