Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_G22
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83239-1|CAB05807.1| 325|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AY533304-1|AAS21306.1| 359|Caenorhabditis elegans BRE-2 protein. 54 1e-07
AL110487-12|CAB54430.2| 308|Caenorhabditis elegans Hypothetical... 54 1e-07
Z71178-12|CAD44086.1| 342|Caenorhabditis elegans Hypothetical p... 52 4e-07
Z81553-13|CAB04502.1| 345|Caenorhabditis elegans Hypothetical p... 52 7e-07
AL009246-8|CAA15841.1| 345|Caenorhabditis elegans Hypothetical ... 52 7e-07
Z83125-4|CAB05616.1| 376|Caenorhabditis elegans Hypothetical pr... 50 3e-06
Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical pr... 46 5e-05
AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical... 46 5e-05
Z83102-8|CAB05465.3| 325|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AL009246-4|CAA15838.2| 368|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z69661-1|CAA93493.1| 253|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z81502-4|CAB04107.2| 357|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81492-7|CAB04032.1| 384|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z68752-6|CAD27607.1| 322|Caenorhabditis elegans Hypothetical pr... 39 0.005
AY038065-1|AAK72094.1| 322|Caenorhabditis elegans beta 1,3-gala... 39 0.005
AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical ... 30 2.5
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical pr... 29 3.3
AY241927-1|AAO85276.1| 330|Caenorhabditis elegans beta-1,3-gala... 29 4.4
AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vul... 29 4.4
Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical pr... 29 5.8
>Z83239-1|CAB05807.1| 325|Caenorhabditis elegans Hypothetical
protein T09F5.1 protein.
Length = 325
Score = 60.9 bits (141), Expect = 1e-09
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Frame = +1
Query: 475 PVVALVATT-PSRFDQRQAIRETW----AKRVLTYFFMGLEGGKIDESMVDIYV-EAKEH 636
P + L+AT+ P F +R AIR+TW ++ ++F +GL K DE + DI + EA+ +
Sbjct: 79 PEILLIATSRPDDFSRRNAIRKTWMNQKTNQITSFFMVGL-SSKTDEKVRDIVMREAELY 137
Query: 637 SDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNPWNLEQVMRGKE 810
D+V+ + + Y L KT +L + + + +A + ++D DV P NL Q K+
Sbjct: 138 RDIVVTSLEDSYTKLAFKTLSILLYAVSKVPSAQLIGRVDGDVLFFP-NLFQSFLDKD 194
>Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical
protein T09E11.10 protein.
Length = 338
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Frame = +1
Query: 469 DIPVVALVATTPSRFDQRQAIRETWA---KRVLTYFFMGLEGGKIDESMVDIYV-EAKEH 636
D ++ V T +R +R+TW R+ + F +GL GG +D+ ++ + EA +
Sbjct: 78 DPEIILTVMTRVDALARRNVLRKTWMTQRNRIKSIFVIGL-GGDVDQKTKELVMSEAALY 136
Query: 637 SDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNP 777
DMV+ N + + + K ML + + +A F+ K+DDDV P
Sbjct: 137 GDMVVTNIEDSFSKVAFKMLSMLLYGFSKVPSAKFIGKVDDDVLFYP 183
>AY533304-1|AAS21306.1| 359|Caenorhabditis elegans BRE-2 protein.
Length = 359
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK----------RVLTYFFMGLEGGKIDESMVDIYVE- 624
++ +V++ F +R +R+TW R+ F +G+ G DE + + +E
Sbjct: 88 ILMIVSSNCDNFARRNILRKTWMNPENSQIIGDGRMKALFLVGINGA--DEKLNAVVLEE 145
Query: 625 AKEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNPWNLEQVMRG 804
AK DM++++ ++Y NL+ KT +L +++ + + N + KID+DV P L ++
Sbjct: 146 AKVFGDMIVIDLEDNYLNLSYKTISLLLYSISKTKSPNLIGKIDEDVLFYPDQLTPLIND 205
Query: 805 K 807
K
Sbjct: 206 K 206
>AL110487-12|CAB54430.2| 308|Caenorhabditis elegans Hypothetical
protein Y39E4B.9 protein.
Length = 308
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK----------RVLTYFFMGLEGGKIDESMVDIYVE- 624
++ +V++ F +R +R+TW R+ F +G+ G DE + + +E
Sbjct: 88 ILMIVSSNCDNFARRNILRKTWMNPENSQIIGDGRMKALFLVGINGA--DEKLNAVVLEE 145
Query: 625 AKEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNPWNLEQVMRG 804
AK DM++++ ++Y NL+ KT +L +++ + + N + KID+DV P L ++
Sbjct: 146 AKVFGDMIVIDLEDNYLNLSYKTISLLLYSISKTKSPNLIGKIDEDVLFYPDQLTPLIND 205
Query: 805 K 807
K
Sbjct: 206 K 206
>Z71178-12|CAD44086.1| 342|Caenorhabditis elegans Hypothetical
protein B0024.15 protein.
Length = 342
Score = 52.4 bits (120), Expect = 4e-07
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Frame = +1
Query: 430 QILIEPSAPCPGSDIPVVALVATTPSRFDQRQAIRETWAKRVLTYFFMGLEG------GK 591
Q + P C ++ + + +T FD RQAIRETWA + + K
Sbjct: 70 QFITVPKKQC-SNNTKLQITILSTAGNFDIRQAIRETWANPNNSEHVANNDVRISFIISK 128
Query: 592 IDESMVDIYV--EAKEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDV 765
++ + E ++ DM++ + +E Y+ L LK +L + C A+F LKIDDD+
Sbjct: 129 TSNEFLNFALQKEIEKFDDMIVTDLYESYELLILKVHAILSYKQSHCQLADFQLKIDDDM 188
Query: 766 FLNPWNLEQVMRGKER 813
++ L + + K++
Sbjct: 189 AVDMDGLYRSLEDKKQ 204
>Z81553-13|CAB04502.1| 345|Caenorhabditis elegans Hypothetical
protein C47F8.3 protein.
Length = 345
Score = 51.6 bits (118), Expect = 7e-07
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK----------RVLTYFFMGLEGGKIDESMVDIYVEA 627
++ LV + F +R +R TW R+ FF+GL G D+++ + +E
Sbjct: 90 ILMLVVSKTKNFARRNVLRSTWMNKENSEMMKSGRMHALFFVGLVPG--DQNLKKLVLEE 147
Query: 628 KE-HSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNP 777
E H DMV+++ + Y NL KT +L + + + + KIDDDV P
Sbjct: 148 AEIHGDMVVVDLEDTYDNLPFKTLALLLYGTSKASQFKIIGKIDDDVMFFP 198
>AL009246-8|CAA15841.1| 345|Caenorhabditis elegans Hypothetical
protein C47F8.3 protein.
Length = 345
Score = 51.6 bits (118), Expect = 7e-07
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK----------RVLTYFFMGLEGGKIDESMVDIYVEA 627
++ LV + F +R +R TW R+ FF+GL G D+++ + +E
Sbjct: 90 ILMLVVSKTKNFARRNVLRSTWMNKENSEMMKSGRMHALFFVGLVPG--DQNLKKLVLEE 147
Query: 628 KE-HSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNP 777
E H DMV+++ + Y NL KT +L + + + + KIDDDV P
Sbjct: 148 AEIHGDMVVVDLEDTYDNLPFKTLALLLYGTSKASQFKIIGKIDDDVMFFP 198
>Z83125-4|CAB05616.1| 376|Caenorhabditis elegans Hypothetical
protein T15D6.5 protein.
Length = 376
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Frame = +1
Query: 445 PSAPCPGSDIPVVALVATTPSRFDQRQAIRETWAK----------RVLTYFFMGLEGGKI 594
P P + ++ +VA+ P +R+ +R+TW R+ F +G+ G
Sbjct: 117 PKIKNPTWNRDILMIVASRPGSVSRRKVLRKTWMNKANSKIIRNGRMQVLFLVGMVAGDR 176
Query: 595 DESMVDIYVEAKEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLN 774
D M + EA+ D++++N + Y NL K +L + + + + KIDDDV
Sbjct: 177 D-LMKAVKKEAESFGDIIVMNLEDTYDNLPFKVLSLLLYGTNKASDFKIIGKIDDDVIFF 235
Query: 775 PWNLEQVM 798
P L ++
Sbjct: 236 PDRLTPLL 243
>Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 45.6 bits (103), Expect = 5e-05
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 433 ILIEPSAPCPGSDIPV-VALVATTPSRFDQRQAIRETWAKRVLTYFFMGLEGGKIDESMV 609
+LI P P + P + ++ + P D R IR TW ++V T + +
Sbjct: 99 VLIRPDLP----EYPKRILVIRSGPGSLDYRNFIRRTWKQQVETLVPVVFVCATSKNDTL 154
Query: 610 DIYVEAKEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNPWNLE 789
I EA ++ D++ +F + Y NL+ K + + +++ + + ++ +DD +N LE
Sbjct: 155 KI--EANKYRDILQFDFEDSYHNLSWKMMAIYGFVIDQLPSVDQIVVTNDDTIVNATALE 212
Query: 790 QVMRGKE 810
QV+ K+
Sbjct: 213 QVLHMKK 219
>AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 45.6 bits (103), Expect = 5e-05
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 433 ILIEPSAPCPGSDIPV-VALVATTPSRFDQRQAIRETWAKRVLTYFFMGLEGGKIDESMV 609
+LI P P + P + ++ + P D R IR TW ++V T + +
Sbjct: 99 VLIRPDLP----EYPKRILVIRSGPGSLDYRNFIRRTWKQQVETLVPVVFVCATSKNDTL 154
Query: 610 DIYVEAKEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNPWNLE 789
I EA ++ D++ +F + Y NL+ K + + +++ + + ++ +DD +N LE
Sbjct: 155 KI--EANKYRDILQFDFEDSYHNLSWKMMAIYGFVIDQLPSVDQIVVTNDDTIVNATALE 212
Query: 790 QVMRGKE 810
QV+ K+
Sbjct: 213 QVLHMKK 219
>Z83102-8|CAB05465.3| 325|Caenorhabditis elegans Hypothetical
protein C54C8.3 protein.
Length = 325
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/116 (23%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK----------RVLTYFFMGLEGGKIDESMVDIYVEA 627
++ +VA+ + +R +R+TW R+ F +GL G+ + + EA
Sbjct: 78 ILIIVASRTDSYARRNILRQTWMSKANSEIVANGRMKPLFLVGLTPGEYKMKKM-VMQEA 136
Query: 628 KEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNPWNLEQV 795
K + D+++++ +++Y+ LT K+ +L + + + + KID+DV P L ++
Sbjct: 137 KLYGDIIVVDMNDNYEELTYKSLAILLYGVSKAPRYQMIGKIDEDVMFFPDKLTEL 192
>AL009246-4|CAA15838.2| 368|Caenorhabditis elegans Hypothetical
protein C47F8.5 protein.
Length = 368
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK----------RVLTYFFMGLEGGKIDESMVDIYVEA 627
++ +VA+ F +R +R+TW R+ F +G+ + + EA
Sbjct: 103 ILMMVASRTDSFARRNVLRKTWMNKNYSEIVRDGRMKALFLVGMVSEDYRVRRI-VMEEA 161
Query: 628 KEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNPWNLEQVMRGK 807
K + DMV+++ + Y +L K+ +L + + + + KID+DV P L ++ GK
Sbjct: 162 KLYGDMVVIDLEDTYDDLPFKSLSLLLYAVSKAPEFKVIGKIDEDVMFFPDKLIPLLDGK 221
>Z69661-1|CAA93493.1| 253|Caenorhabditis elegans Hypothetical
protein F48F7.3 protein.
Length = 253
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +1
Query: 517 QRQAIRETWAKR--VLTYFFMGLEGGKIDESMVDIYVEAKEHSDMVILNFHEHYQNLTLK 690
QR+ W + YF +G + ID VDI E K + D++ ++ +E+Y N+T K
Sbjct: 2 QRENFGPAWLNENNAVMYFIVGTD---ID---VDIDDEIKTYEDIIQVDINENYHNITYK 55
Query: 691 TGFMLKWTLERCATA-NFLLKIDDDVFLNPWNLEQVMR 801
F + + +C LLKIDDDV ++ L+ +++
Sbjct: 56 AIFWIN-EINKCRHGPKLLLKIDDDVHIDMIGLQFLIK 92
>Z81502-4|CAB04107.2| 357|Caenorhabditis elegans Hypothetical
protein F14B6.4 protein.
Length = 357
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK----------RVLTYFFMGLEGGKIDESMVDIYVEA 627
++ +VA+ F +R +R+TW R+ F +G+ G + EA
Sbjct: 90 ILMIVASRTDSFARRNVLRKTWMNPENSEIIKDGRMKALFLVGMTDGDDSRMRKVVMEEA 149
Query: 628 KEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNP 777
+ + DMV+++ + Y+ L K+ L + + + + KID+D+ P
Sbjct: 150 RIYGDMVVVDLKDTYEELPFKSLTTLLYGTSKASEFKLIGKIDEDIMFFP 199
>Z81492-7|CAB04032.1| 384|Caenorhabditis elegans Hypothetical
protein E03H4.11 protein.
Length = 384
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK----------RVLTYFFMGLEGGKIDESMVDIYVEA 627
++ +VA+ + +R +R+TW R+ F +GL G + + EA
Sbjct: 117 ILMIVASRTDSYARRNIMRQTWMNKSDSEIVANGRMKPLFLVGLTPGDYKMKKM-VMQEA 175
Query: 628 KEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCATANFLLKIDDDVFLNP 777
K + D+++++ ++ Y+ LT K+ +L + + + + KID+DV P
Sbjct: 176 KLYGDIIVVDMNDTYEELTYKSLAILLYGVSKAPRYQMIGKIDEDVIFFP 225
>Z68752-6|CAD27607.1| 322|Caenorhabditis elegans Hypothetical
protein T12G3.8 protein.
Length = 322
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/121 (21%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK-------RVLTYFFMGLEGGKIDESMVDIYVEAKEH 636
++ ++ ++ R+++R+TW V+ F +G E M I VE++++
Sbjct: 79 IIIIIKSSAKNGPMRESVRKTWGVFRMIDGVEVMPIFIVGRVENM--EIMRRIDVESEKY 136
Query: 637 SDMVILNFHEHYQNLTLKTGFMLKWTL--ERCATANFLLKIDDDVFLNPWNLEQVMRGKE 810
D++ ++ + Y+N TLK + + +C++ +F +DDD ++ NL + + K+
Sbjct: 137 KDILAISDIDSYRNNTLKLFGAIDYAANPNQCSSPDFTFLVDDDYLVHIPNLVKFAKTKQ 196
Query: 811 R 813
+
Sbjct: 197 K 197
>AY038065-1|AAK72094.1| 322|Caenorhabditis elegans beta
1,3-galactosyltransferaseBRE-5 protein.
Length = 322
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/121 (21%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Frame = +1
Query: 478 VVALVATTPSRFDQRQAIRETWAK-------RVLTYFFMGLEGGKIDESMVDIYVEAKEH 636
++ ++ ++ R+++R+TW V+ F +G E M I VE++++
Sbjct: 79 IIIIIKSSAKNGPMRESVRKTWGVFRMIDGVEVMPIFIVGRVENM--EIMRRIDVESEKY 136
Query: 637 SDMVILNFHEHYQNLTLKTGFMLKWTL--ERCATANFLLKIDDDVFLNPWNLEQVMRGKE 810
D++ ++ + Y+N TLK + + +C++ +F +DDD ++ NL + + K+
Sbjct: 137 KDILAISDIDSYRNNTLKLFGAIDYAANPNQCSSPDFTFLVDDDYLVHIPNLVKFAKTKQ 196
Query: 811 R 813
+
Sbjct: 197 K 197
>AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical
protein K03H6.4 protein.
Length = 315
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 244 FLNVLV-NKNTFVILILFYFSRTKHISTALFNK*IHFELNY*IDSSFLCC*YDSWTFVMI 68
F+ V V NK+ +I L+ K I+ L ++ E+ F CC +S T ++
Sbjct: 237 FMLVFVENKSLLLISALYSLIMFKSIANFLCMFLVYHEIRQIFVYIFSCCPKESSTIQVV 296
Query: 67 RFNSNNQNLK 38
+FN N +K
Sbjct: 297 QFNKNTGKIK 306
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = -3
Query: 253 IIIFLNVLVNKNTFVILILFYFSRTKHISTALFNK 149
I + L +L++ T+++LIL + ++KH+++A NK
Sbjct: 188 ISMHLFLLISALTYILLILNIWKKSKHLTSAKLNK 222
>Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical
protein B0564.4 protein.
Length = 523
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 234 TFRKIIM---RRRIFVILPFLLGLGVTIVACRWT 326
TF +I +R F+ L F+LG VTIV RWT
Sbjct: 61 TFESVIRYCDKRLSFIPLEFVLGFFVTIVVDRWT 94
>AY241927-1|AAO85276.1| 330|Caenorhabditis elegans
beta-1,3-galactosyltransferase protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +1
Query: 490 VATTPSRFDQRQAIRETWAKR-------VLTYFFMGLEGGKIDESMVDIYVEAKEHSDMV 648
+ T+P+ ++RQ +R+TW + + F +G G ++ + + E ++ D+
Sbjct: 64 ILTSPNETERRQNVRDTWFRLSTKGPSVFIAKFAVGTMGLAAEDRRL-LAEENEKFGDLA 122
Query: 649 ILNFHEH-YQNLTLKT 693
+L+ HE Y+ L KT
Sbjct: 123 LLDRHEESYERLAKKT 138
>AC024746-16|AAF60408.1| 330|Caenorhabditis elegans Squashed vulva
protein 2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +1
Query: 490 VATTPSRFDQRQAIRETWAKR-------VLTYFFMGLEGGKIDESMVDIYVEAKEHSDMV 648
+ T+P+ ++RQ +R+TW + + F +G G ++ + + E ++ D+
Sbjct: 64 ILTSPNETERRQNVRDTWFRLSTKGPSVFIAKFAVGTMGLAAEDRRL-LAEENEKFGDLA 122
Query: 649 ILNFHEH-YQNLTLKT 693
+L+ HE Y+ L KT
Sbjct: 123 LLDRHEESYERLAKKT 138
>Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical
protein C38H2.1 protein.
Length = 863
Score = 28.7 bits (61), Expect = 5.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 379 LEHFIRNRSLSHYFDNIQILIEP 447
+ HFI ++S+ Y+DN +L++P
Sbjct: 182 INHFIDSKSVRRYYDNSALLLDP 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,634,754
Number of Sequences: 27780
Number of extensions: 427540
Number of successful extensions: 1051
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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