Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_G20
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0107 + 14504065-14504448,14504545-14504922,14506011-145066...    50   2e-06
10_01_0015 - 187905-188432                                             28   8.1  
08_01_0606 - 5321751-5321819,5321950-5322192,5322279-5322377,532...    28   8.1  
04_04_0714 + 27496678-27497392,27499080-27499138,27499179-27499370     28   8.1  

>03_03_0107 +
           14504065-14504448,14504545-14504922,14506011-14506619,
           14507110-14507237,14507829-14507832
          Length = 500

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
 Frame = -1

Query: 566 WDCETILSTYSNLYNHPKLIEEPKKPK-RI--VIDPKTGIPKDVLGADG 429
           WDCETI+STYSNL NHP  I+ P  PK R+  V   +T   KD++   G
Sbjct: 360 WDCETIVSTYSNLDNHPGKIQTPGNPKNRLPKVFPGETATTKDIIRLQG 408


>10_01_0015 - 187905-188432
          Length = 175

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 312 GXRAERGQQRVGAAGDVGSARGGLAHGV 395
           G R  RG+   GAA  VG+ RGG A GV
Sbjct: 50  GGRRRRGRSS-GAADGVGARRGGAADGV 76


>08_01_0606 -
           5321751-5321819,5321950-5322192,5322279-5322377,
           5322463-5322942,5323069-5323167,5323306-5323427,
           5323517-5323635,5323734-5323801,5323889-5324074,
           5324169-5324244,5324339-5324418,5324505-5324561,
           5324980-5325122,5325208-5325352,5325652-5325813,
           5325893-5326078,5326263-5326355,5326437-5326597,
           5327005-5327109,5328263-5328278
          Length = 902

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 518 PKLIEEPKKPKRIVIDPKTGIP 453
           PKL E P KP R+++   TG+P
Sbjct: 79  PKLAEIPFKPARVLLQDFTGVP 100


>04_04_0714 + 27496678-27497392,27499080-27499138,27499179-27499370
          Length = 321

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 321 AERGQQRVGAAGDVGSARGGLAHGVEPGQRLHRQL 425
           A  G  RVGA     S   G  H + P +  HRQ+
Sbjct: 265 AAHGSSRVGAERLADSPESGNGHWIHPSRHHHRQI 299


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,596,415
Number of Sequences: 37544
Number of extensions: 210445
Number of successful extensions: 753
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)