Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_G20
         (842 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009855-1|AAH09855.1|  475|Homo sapiens LTV1 homolog (S. cerevi...    70   1e-11
AL049844-1|CAI21442.1|  475|Homo sapiens LTV1 homolog (S. cerevi...    70   1e-11
AK027815-1|BAB55388.1|  299|Homo sapiens protein ( Homo sapiens ...    70   1e-11

>BC009855-1|AAH09855.1|  475|Homo sapiens LTV1 homolog (S.
           cerevisiae) protein.
          Length = 475

 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = -1

Query: 569 RWDCETILSTYSNLYNHPKLIEEPKKPKRIVIDPKTGIPKDVLGADGGKLTVKALARFNA 390
           +WDCE+I STYSNLYNHP+LI+   KPK+I I  KTGIP +VL   G  LT K   R   
Sbjct: 347 KWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKG--LTAKQTERIQM 404

Query: 389 MS 384
           ++
Sbjct: 405 IN 406


>AL049844-1|CAI21442.1|  475|Homo sapiens LTV1 homolog (S.
           cerevisiae) protein.
          Length = 475

 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = -1

Query: 569 RWDCETILSTYSNLYNHPKLIEEPKKPKRIVIDPKTGIPKDVLGADGGKLTVKALARFNA 390
           +WDCE+I STYSNLYNHP+LI+   KPK+I I  KTGIP +VL   G  LT K   R   
Sbjct: 347 KWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKG--LTAKQTERIQM 404

Query: 389 MS 384
           ++
Sbjct: 405 IN 406


>AK027815-1|BAB55388.1|  299|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14909 fis, clone PLACE1006037. ).
          Length = 299

 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = -1

Query: 569 RWDCETILSTYSNLYNHPKLIEEPKKPKRIVIDPKTGIPKDVLGADGGKLTVKALARFNA 390
           +WDCE+I STYSNLYNHP+LI+   KPK+I I  KTGIP +VL   G  LT K   R   
Sbjct: 171 KWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKG--LTAKQTERIQM 228

Query: 389 MS 384
           ++
Sbjct: 229 IN 230


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,815,408
Number of Sequences: 237096
Number of extensions: 1090661
Number of successful extensions: 2663
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2663
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)