Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_G19
(886 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 94 4e-18
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 7e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 52 1e-05
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 46 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 38 0.45
UniRef50_A1WXA2 Cluster: VanZ family protein precursor; n=1; Hal... 35 3.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 94.3 bits (224), Expect = 4e-18
Identities = 57/100 (57%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Frame = +2
Query: 539 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPLXAPSXRSPXXDPAAYRXTCPPFSLR 718
FSIGSAPLTSITKIDAQVRGGETRQDYKDTRR PL APS + P TCPPFSLR
Sbjct: 16 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSC-ALLFRPCRLPDTCPPFSLR 74
Query: 719 ES--VALSH----XSRCRYLXSGXGXSXPSWGCXXXPPRS 820
E+ ++H RCR PSW PP S
Sbjct: 75 EAWRFLIAHAVGISVRCRSF-------APSWAVCTNPPFS 107
Score = 39.5 bits (88), Expect = 0.11
Identities = 26/64 (40%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 639 PXKLPRCAXXXXXXXXXGIPVRLSPFG--KAWRFLIXHAVGISXXV*VXPXQAGAVCXNP 812
P + P CA +P PF +AWRFLI HAVGIS + AVC NP
Sbjct: 49 PLEAPSCALLFRPCR---LPDTCPPFSLREAWRFLIAHAVGISVRCRSFAP-SWAVCTNP 104
Query: 813 PVQP 824
P P
Sbjct: 105 PFSP 108
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 7e-12
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 539 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPLXAPS 655
FSIGSAPLTSITK DAQ+ GGETRQDYKDTRR PL APS
Sbjct: 52 FSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPS 90
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 68.9 bits (161), Expect = 2e-10
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 539 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPLXAPS 655
FSIGSAPLTSI K DAQ+ GGETRQDYKD RR PL APS
Sbjct: 84 FSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPS 122
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 330 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 428
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 506 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 393
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 306 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 473
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -3
Query: 812 GVXAXSPSLXXXDLXXX*DTYSVXYEKAPRFPEGRKADRYXGKRQGRXQESAXRELXGGN 633
GV A SP+ DT SV YEKAPRFP+G+KA++ GKRQGR + A G
Sbjct: 27 GVRAYSPAWSERPKPSR-DTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRR-AHEGAAGEK 84
Query: 632 AWYLYSPVG 606
+ SPVG
Sbjct: 85 SPASLSPVG 93
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 45.6 bits (103), Expect = 0.002
Identities = 32/77 (41%), Positives = 35/77 (45%)
Frame = +2
Query: 590 VRGGETRQDYKDTRRXPLXAPSXRSPXXDPAAYRXTCPPFSLRESVALSHXSRCRYLXSG 769
VR GETRQD K P S +PA R PPFSL SVALSH S + +
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALS-CSNPAVSRIPVPPFSLAGSVALSHSSHSG-ISAR 80
Query: 770 XGXSXPSWGCXXXPPRS 820
PSW PP S
Sbjct: 81 CRSFAPSWAVSKNPPFS 97
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 425 HSKAVIRLSTESGDNAGKNM 484
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 304 SALMNRPTRGERRFAYW 354
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 376 ERGSGRAPNTQTASPRALADSLMQ 305
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 37.5 bits (83), Expect = 0.45
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 539 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPLXAPS 655
F S PLT+ITKI Q + +T+ +YK T PL +PS
Sbjct: 69 FPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPS 107
>UniRef50_A1WXA2 Cluster: VanZ family protein precursor; n=1;
Halorhodospira halophila SL1|Rep: VanZ family protein
precursor - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 1131
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -3
Query: 566 SSGGR---SLWKTPATRPFYGSWPFAGLLLTCSFL-RYPLILWITVLPPL 429
SSGG ++W P + W AGLL+ L RYPL W+ VLPPL
Sbjct: 504 SSGGLLAVAIWLAAWAWPAWPGWLAAGLLIYAVLLWRYPLA-WLWVLPPL 552
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 515 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 393
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 187 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 354
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,362,735
Number of Sequences: 1657284
Number of extensions: 11989844
Number of successful extensions: 28435
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28428
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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