Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_G15
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522...    29   5.0  

>04_03_0205 +
           12649724-12650191,12651493-12652025,12652114-12652239,
           12652625-12652724,12652880-12652899,12653035-12653137,
           12653213-12653351,12653448-12653662,12653772-12654320
          Length = 750

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 458 IDQSGCNEPNDVFIKELLDAGAVIKYINTE 547
           +D+ GCN P D+ I E +D  +V    NTE
Sbjct: 620 LDEGGCNNPEDM-ITESVDLNSVTNVDNTE 648


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,378,606
Number of Sequences: 37544
Number of extensions: 314213
Number of successful extensions: 561
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)