Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_G15
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens ...    65   4e-10
BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene...    63   1e-09
AK130743-1|BAC85419.1|  530|Homo sapiens protein ( Homo sapiens ...    33   1.4  
BC024325-1|AAH24325.1|  611|Homo sapiens adenosylhomocysteinase ...    31   5.6  
BC008349-1|AAH08349.1|  611|Homo sapiens adenosylhomocysteinase ...    31   5.6  
AB020635-1|BAA74851.1|  619|Homo sapiens KIAA0828 protein protein.     31   5.6  

>AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33580 fis, clone BRAMY2011841. ).
          Length = 252

 Score = 64.9 bits (151), Expect = 4e-10
 Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
 Frame = +2

Query: 254 KSRNTELNDVMVFCKLHL-NAYNCFDKLMSFIEAAKHNIKVCMPGIHNVAIQGRLVEMLK 430
           ++   EL ++   C   L +  +   +L+  + AA+ ++ +C+    +  + GR V++L 
Sbjct: 56  RAPGAELAELPEGCPCGLPHGESALSRLLRALLAARASLDLCLFAFSSPQL-GRAVQLLH 114

Query: 431 KKNIKISIVIDQSGCNEPNDVFIKELLDAGAVIKYINTEPYTMQHKFCLIDDKVLMTGTL 610
           ++ +++ +V D       N   I  L  AG  +++ + +P  M HKF ++D +VL+TG+L
Sbjct: 115 QRGVRVRVVTD-CDYMALNGSQIGLLRKAGIQVRH-DQDPGYMHHKFAIVDKRVLITGSL 172

Query: 611 NWGNDRSSDHWNYVYITSKPKLVEPVSKEFKYMWLSSKDLNYSQFDSKPINEDECCNTES 790
           NW      ++   V IT   + V    +EF+ +W       Y+ F  K  +   C    S
Sbjct: 173 NWTTQAIQNNRENVLITEDDEYVRLFLEEFERIWEQFNPTKYTFFPPKK-SHGSCAPPVS 231

Query: 791 R*SHRKL 811
           R   R L
Sbjct: 232 RAGGRLL 238


>BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene
           product protein.
          Length = 252

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
 Frame = +2

Query: 254 KSRNTELNDVMVFCKLHL-NAYNCFDKLMSFIEAAKHNIKVCMPGIHNVAIQGRLVEMLK 430
           ++   EL ++   C   L +  +   +L+  + AA+ ++ +C+    +  + G  V++L 
Sbjct: 56  RAPGAELAELPEGCPCGLPHGESALSRLLRALLAARASLDLCLFAFSSPQL-GHAVQLLH 114

Query: 431 KKNIKISIVIDQSGCNEPNDVFIKELLDAGAVIKYINTEPYTMQHKFCLIDDKVLMTGTL 610
           ++ +++ +V D       N   I  L  AG  +++ + +P  M HKF ++D +VL+TG+L
Sbjct: 115 QRGVRVRVVTD-CDYMALNGSQIGLLRKAGIQVRH-DQDPGYMHHKFAIVDKRVLITGSL 172

Query: 611 NWGNDRSSDHWNYVYITSKPKLVEPVSKEFKYMWLSSKDLNYSQFDSKPINEDECCNTES 790
           NW      ++   V IT   + V    +EF+ +W       Y+ F  K  +   C    S
Sbjct: 173 NWTTQAIQNNRENVLITEDDEYVRLFLEEFERIWEQFNPTKYTFFPPKK-SHGSCAPPVS 231

Query: 791 R*SHRKL 811
           R   R L
Sbjct: 232 RAGGRLL 238


>AK130743-1|BAC85419.1|  530|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27233 fis, clone SYN06481, highly similar to
           Adenosylhomocysteinase (EC 3.3.1.1). ).
          Length = 530

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 517 WCSNQVH*YRTVYNAT*ILF-DRRQSFNDRYTKLGKRSIVRSL 642
           WC+       T++ +  I F D++Q FN R TK+G+RS+ RS+
Sbjct: 25  WCTVCSAHQGTIFLSLKIQFADQKQEFNKRPTKIGRRSLSRSI 67


>BC024325-1|AAH24325.1|  611|Homo sapiens adenosylhomocysteinase 3
           protein.
          Length = 611

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +1

Query: 577 DRRQSFNDRYTKLGKRSIVRSL 642
           D++Q FN R TK+G+RS+ RS+
Sbjct: 127 DQKQEFNKRPTKIGRRSLSRSI 148


>BC008349-1|AAH08349.1|  611|Homo sapiens adenosylhomocysteinase 3
           protein.
          Length = 611

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +1

Query: 577 DRRQSFNDRYTKLGKRSIVRSL 642
           D++Q FN R TK+G+RS+ RS+
Sbjct: 127 DQKQEFNKRPTKIGRRSLSRSI 148


>AB020635-1|BAA74851.1|  619|Homo sapiens KIAA0828 protein protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +1

Query: 577 DRRQSFNDRYTKLGKRSIVRSL 642
           D++Q FN R TK+G+RS+ RS+
Sbjct: 135 DQKQEFNKRPTKIGRRSLSRSI 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,221,815
Number of Sequences: 237096
Number of extensions: 1872106
Number of successful extensions: 3026
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3026
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)