Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_G15
         (885 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    24   2.1  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   3.7  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.7  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   4.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   6.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   6.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.6  

>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/31 (22%), Positives = 20/31 (64%)
 Frame = +2

Query: 659 TSKPKLVEPVSKEFKYMWLSSKDLNYSQFDS 751
           + +PK++  +S  +KY   ++ + NY+ +++
Sbjct: 309 SKEPKIISSLSNNYKYSNYNNYNNNYNNYNN 339


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = +2

Query: 665 KPKLVEPVSKEFKYMWLSSKDLNYSQFDSK 754
           +PK++  +S  + Y   ++ + NY+ ++ K
Sbjct: 78  EPKIISSLSNNYNYSNYNNYNNNYNNYNKK 107


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 569 FCLIDDKVLMTGTLNWGNDRSSDHWN 646
           FC   + V     LN G+D S+D+W+
Sbjct: 525 FCGTPEYVAPEVILNKGHDISADYWS 550


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 386 IHNVAIQ-GRLVEMLKKKNIKISI 454
           I N  IQ  +LVEM  +KNI I +
Sbjct: 89  IQNDEIQLDKLVEMANRKNISIDV 112


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 659 TSK-PKLVEPVSKEFKYMWLSSKDLNYS 739
           TSK PK++  +S  +KY   ++ + NY+
Sbjct: 75  TSKEPKIISSLSNNYKYSNYNNYNNNYN 102


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 659 TSK-PKLVEPVSKEFKYMWLSSKDLNYS 739
           TSK PK++  +S  +KY   ++ + NY+
Sbjct: 75  TSKEPKIISSLSNNYKYSNYNNYNNNYN 102


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 163  LQQHLXELFWAATTTR 116
            LQQH+   FW   +TR
Sbjct: 1279 LQQHVEYQFWVTGSTR 1294


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 163  LQQHLXELFWAATTTR 116
            LQQH+   FW   +TR
Sbjct: 1275 LQQHVEYQFWVTGSTR 1290


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,029
Number of Sequences: 438
Number of extensions: 3506
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)