Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_G14
         (1244 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1228|AAF58703.1|  120|Drosophila melanogaster CG13227-P...    30   7.6  
AY122168-1|AAM52680.1|  318|Drosophila melanogaster LD26105p pro...    29   10.0 
AE014296-977|AAF50763.2|  312|Drosophila melanogaster CG10591-PA...    29   10.0 

>AE013599-1228|AAF58703.1|  120|Drosophila melanogaster CG13227-PA
           protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 311 GGXXXGXPPPPPKXXPXXXFFGGGXGG 391
           G    G PPPP    P   ++GGG GG
Sbjct: 64  GPPPFGPPPPPFFGPPPPPYYGGGFGG 90


>AY122168-1|AAM52680.1|  318|Drosophila melanogaster LD26105p
           protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 10.0
 Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
 Frame = -3

Query: 390 PPXPPPKKXXXGXXXGGGGGFPXXXP--PXXXFXXGXRXXXAPPG 262
           PP PP  +        G  G+P   P  P   F  G R    PPG
Sbjct: 46  PPGPPGNQNGLSGSGSGYWGYPPTGPYPPNLPFIQGPRGLPGPPG 90


>AE014296-977|AAF50763.2|  312|Drosophila melanogaster CG10591-PA
           protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 10.0
 Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
 Frame = -3

Query: 390 PPXPPPKKXXXGXXXGGGGGFPXXXP--PXXXFXXGXRXXXAPPG 262
           PP PP  +        G  G+P   P  P   F  G R    PPG
Sbjct: 40  PPGPPGNQNGLSGSGSGYWGYPPTGPYPPNLPFIQGPRGLPGPPG 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,121,487
Number of Sequences: 53049
Number of extensions: 635419
Number of successful extensions: 2161
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6662005335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)