Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_G11
(909 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.001
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.032
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.042
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.098
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.098
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.23
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.8
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 27 3.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.4
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 8.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.001
Identities = 31/118 (26%), Positives = 35/118 (29%)
Frame = +3
Query: 540 KXPPPXGGXGXXXGXPPPPPQKRXXPXEXXXXXXXXXXXXXXXXXXPPXXGXPPXPFFXX 719
+ PPP P PPP PP P P
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPA-----IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Query: 720 XGQPPGXNXGXPXGXFXSPPPPPXKXXKXPPPSXGXGTPAXXXKXSPXXPPXXPPPPP 893
PP P G +PP PP P P+ G PA +P PP P PPP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA---GMPA-----APPLPPAAPAPPP 478
Score = 33.5 bits (73), Expect = 0.042
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +3
Query: 696 PPXPFFXXXGQPPGXNXGXPXGXFXSPPPPPXK--XXKXPPPSXGXGTPAXXXKXSPXXP 869
PP P G+PP N G PPPPP P P G P S
Sbjct: 314 PPPPSRRNRGKPPIGN-GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 870 PXXPPP 887
PPP
Sbjct: 373 GRQPPP 378
Score = 33.5 bits (73), Expect = 0.042
Identities = 30/122 (24%), Positives = 32/122 (26%), Gaps = 2/122 (1%)
Frame = +3
Query: 549 PPXGGXGXXXGXPPPPPQKRXXPXEXXXXXXXXXXXXXXXXXXPPXXGXPPXPFFXXXGQ 728
PP G PPPPP P PP PP Q
Sbjct: 325 PPIGNGSSNSSLPPPPP-----PPRSNAAGSIPLPPQGRSAPPPP----PPRSAPSTGRQ 375
Query: 729 PPGXNXGXPXGXFXSPPP--PPXKXXKXPPPSXGXGTPAXXXKXSPXXPPXXPPPPPXXX 902
PP + +PPP P PP T P PP PP P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 903 GP 908
P
Sbjct: 436 PP 437
Score = 33.5 bits (73), Expect = 0.042
Identities = 28/117 (23%), Positives = 30/117 (25%), Gaps = 2/117 (1%)
Frame = +3
Query: 546 PPPXGGXGXXXGXPPPPPQKRXXPXEXXXXXXXXXXXXXXXXXXPPXXGXPPXPFFXXXG 725
PPP G P PPQ R P PP P G
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 726 Q--PPGXNXGXPXGXFXSPPPPPXKXXKXPPPSXGXGTPAXXXKXSPXXPPXXPPPP 890
+ P G P P P PPS P +P PP P P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 31.5 bits (68), Expect = 0.17
Identities = 29/127 (22%), Positives = 31/127 (24%), Gaps = 11/127 (8%)
Frame = +3
Query: 546 PPPXGGXGXXXGXPPPPPQKRXXPXEXXXXXXXXXXXXXXXXXXPPXXGXPPXPF--FXX 719
PP G PPPPP + P G P P
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 720 XGQPPGXNXGXPXGXFXSPPP---------PPXKXXKXPPPSXGXGTPAXXXKXSPXXPP 872
PP P + PP PP PPS P P P
Sbjct: 385 VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 873 XXPPPPP 893
PP PP
Sbjct: 445 AAPPLPP 451
Score = 30.7 bits (66), Expect = 0.30
Identities = 30/108 (27%), Positives = 32/108 (29%)
Frame = +3
Query: 585 PPPPPQKRXXPXEXXXXXXXXXXXXXXXXXXPPXXGXPPXPFFXXXGQPPGXNXGXPXGX 764
PPPPP +R PP PP P G P P G
Sbjct: 313 PPPPPSRR-------NRGKPPIGNGSSNSSLPP---PPPPPRSNAAGSIP----LPPQGR 358
Query: 765 FXSPPPPPXKXXKXPPPSXGXGTPAXXXKXSPXXPPXXPPPPPXXXGP 908
PPPPP PS G P + PP PP P P
Sbjct: 359 SAPPPPPPRS-----APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 773 PPPPPPKXXKXPPPFXGXGDPRXXKXXFPXXPPGXPPPPXPP 898
PPPPPP P G G PPPP PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSN----------SSLPPPPPPP 343
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +2
Query: 773 PPPPPPKXXKXPPPFXGXGDPRXXKXXFPXXPPGXPPPPXPP 898
P P PP PP P P PP P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.032
Identities = 24/76 (31%), Positives = 24/76 (31%)
Frame = -3
Query: 811 GGXFXXFXGGGGGDXKXPXGXPXFXPGGWPXXXKXGXGGFPXXGGXXXXXXXXXXXXXXX 632
GG F F GG GG P G F G G GGF GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGF--GGGPGGFEGGPGGFGGGP 244
Query: 631 XXXSXGXXLFWGGGGG 584
G F GG GG
Sbjct: 245 GGFGGGLGGFGGGPGG 260
Score = 26.2 bits (55), Expect = 6.4
Identities = 25/69 (36%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 894 GXGGGGXPGGXXGXFXXXXRGSPXPXKGG-GXFXXXGGGGGGIXKXXTGXPXFXXGVGPX 718
G G GG P G G G GG G F GGG GG G P G GP
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGF---GGGPGGF----EGGPG-GFGGGPG 245
Query: 717 XXKXXLGXF 691
LG F
Sbjct: 246 GFGGGLGGF 254
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 897 GGXGGG-GXPGGXXGXFXXXXRGSPXPXKGGGXFXXXGGGGGG 772
GG GG G PGG G G P GG GGG GG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGG---PGGFGGGLGGFGGGPGG 260
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.042
Identities = 28/107 (26%), Positives = 29/107 (27%), Gaps = 2/107 (1%)
Frame = +3
Query: 579 GXPP-PPPQKRXXPXEXXXXXXXXXXXXXXXXXXPPXXGXPPXPFFXXXGQP-PGXNXGX 752
G PP P P P P G PP P P P + G
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI 1178
Query: 753 PXGXFXSPPPPPXKXXKXPPPSXGXGTPAXXXKXSPXXPPXXPPPPP 893
P P P PPPS P P PP PP P
Sbjct: 1179 PP-----VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +3
Query: 681 PXXGXPPXPFFXXXGQPPGXNXGXPXGXFXSPP-PPPXKXXKXPPPSXG-XGTPAXXXKX 854
P G PP P PP P PP PPP P PS G P K
Sbjct: 1184 PAAGVPPVP-------PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 855 SPXXPPXXPPP 887
P P P
Sbjct: 1237 PPVPAPSSEAP 1247
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 773 PPPPPPKXXKXPPPFXGXGDPRXXKXXFPXXPPGXPPPPXPP 898
PP P P P P G P K PP PP PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPA-AGVPPVPPPSEAPP 1199
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +2
Query: 752 PVXXFXIPPPPPPKXX--KXPPPFXGXGDPRXXKXXFPXXPPGXPPPPXPP 898
P IPP P P PPP P+ P PP PP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +3
Query: 681 PXXGXPPXPFFXXXGQPPGXNXGXPXGXFXSPPPPPXKXXKXPPPSXGXGTPAXXXKXSP 860
P G PP P G PP P P P PPPS P P
Sbjct: 1174 PSSGIPPVPK-PAAGVPPVP----PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 861 XXPPXXPPPP 890
P PP
Sbjct: 1229 VPVPTAKAPP 1238
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.098
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 773 PPPPPPKXXKXPPPFXGXGDPRXXKXXFPXXPPGXPPPPXP 895
P PPPP PPP P PP PPPP P
Sbjct: 1705 PTPPPPPMSVPPPP---------SAPPMPAGPPSAPPPPLP 1736
Score = 30.3 bits (65), Expect = 0.39
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +3
Query: 723 GQPPGXNXGXPXGXFXSPPPPPXKXXKXPPPSXGXGTPAXXXKXSPXXPPXXPPPP-PXX 899
G P P S PP PPP P P PP PPPP P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSV-PPPPSAPPMPAGPPSAPPPPLPAS 1738
Query: 900 XGP 908
P
Sbjct: 1739 SAP 1741
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.098
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 740 KXGXPVXXFXIPPPPPPKXXKXPPPFXGXGDPRXXKXXFPXXPPGXPPPPXPP 898
K P I P P P PPP G P G PPPP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +3
Query: 774 PPPPPXKXXKXPPPSXGXGTPAXXXKXSPXXPPXXPPPPPXXXG 905
PPPPP P P+ P P PP PPPPP G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGP--PP--PPPPPGVAG 772
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 774 PPPPPXKXXKXPPPSXGXGTPAXXXKXSPXXPPXXPPPPP 893
P PPP PPP P + PP PPPPP
Sbjct: 750 PVPPPAPIMGGPPP------PPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +2
Query: 752 PVXXFXIPPPPPPKXXKXPP-PFXGXGDPRXXKXXFPXXPPGXPPPPXP 895
P +P P P PP P G P P PPPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 546 PPPXGGXGXXXGXPPPPP 599
PPP G G PPPPP
Sbjct: 765 PPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 792 KXXKXPPPSXGXGTPAXXXKXSPXXPP--XXPPPPPXXXG 905
K PPP+ TPA P P PPPPP G
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.23
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 6/83 (7%)
Frame = +3
Query: 678 PPXXGXPPXP---FFXXXGQPPGXNXGXPXGXFXSPPPPPXKXXKXP---PPSXGXGTPA 839
PP PP P PP + P S PP P K P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPA--SAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 840 XXXKXSPXXPPXXPPPPPXXXGP 908
+P P PP PP P
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPP 204
Score = 30.3 bits (65), Expect = 0.39
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +3
Query: 678 PPXXGXPPXPFFXXXGQPPGXNXGXPXGXFXSPPPPPXKXXKXPPPSXGXGTPAXXXKXS 857
PP PP PP + P PP P K PP + +
Sbjct: 144 PPRPSIPPPS---PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAV------ 194
Query: 858 PXXPPXXPPPP 890
P PP PPPP
Sbjct: 195 PPMPPKVPPPP 205
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 866 PPGXPPPPXPP 898
PPG PPPP PP
Sbjct: 5 PPGNPPPPPPP 15
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +2
Query: 773 PPPPPPKXXKXPPPFXGXGDPRXXKXXFPXXPPGXPPPPXPP 898
PPPPPP PP F PP PPPP PP
Sbjct: 9 PPPPPP-----PPGFE---------------PPSQPPPPPPP 30
Score = 23.4 bits (48), Expect(2) = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 769 NPPPPPP 789
NPPPPPP
Sbjct: 8 NPPPPPP 14
Score = 22.2 bits (45), Expect(2) = 2.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 772 PPPPPPXXTK 801
PPPPPP K
Sbjct: 25 PPPPPPGYVK 34
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Frame = +2
Query: 773 PPPPPPKXXKX-------PPPFXGXGDPRXXKXXFPXXPPGXPPPPXPP 898
PPPPPP K P + P PP PPPP PP
Sbjct: 907 PPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPP--PPPPPPP 953
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Frame = +3
Query: 771 SPPPPPXKXXKXP------PPSXGX-GTPAXXXKXSPXXPPXXPPPPP 893
+PPPPP K P S P PP PPPPP
Sbjct: 906 TPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 830 DPRXXKXXFPXXPPGXPPPPXP 895
D + +P PP PPPP P
Sbjct: 53 DTTHSRHRYPETPPSLPPPPSP 74
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +3
Query: 807 PPPSXGXGTPAXXXKXSPXX--PPXXPPPPP 893
PPPS + A P PP PPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 897 GGXGG-GGXPGGXXGXFXXXXRGSPXPXKGGGXFXXXGGGGGG 772
GG GG G GG G F RG GGG GGG G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGG----FGGGSRGGFGGGSRG 176
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,831,100
Number of Sequences: 5004
Number of extensions: 30084
Number of successful extensions: 368
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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