Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_G09
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_1070 + 10932102-10932291,10936686-10936947,10937158-109372...    31   1.2  
05_02_0110 + 6702828-6703065,6703145-6703351,6703536-6703684,670...    29   3.8  
09_03_0127 + 12573429-12574857,12575269-12575903                       29   5.0  
05_01_0327 - 2565574-2565654,2566037-2566099,2566511-2566591,256...    29   5.0  
06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648,898...    29   6.6  
03_05_0264 - 22510997-22511012,22511641-22511709,22511783-225119...    29   6.6  
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049...    29   6.6  

>08_01_1070 +
           10932102-10932291,10936686-10936947,10937158-10937292,
           10937468-10938791
          Length = 636

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 434 AVLFIFFSTPLWICVLPGPALAIVTYIGCTCVHIELGHKH 553
           A +F+  S P W+ V    ALA ++ +    ++ +LGH+H
Sbjct: 322 AQVFLRDSFPTWVAVASYAALAALSVVAVPLLYPQLGHRH 361


>05_02_0110 +
           6702828-6703065,6703145-6703351,6703536-6703684,
           6704096-6704369,6706011-6706228
          Length = 361

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 516 PIYVTMASAGPGSTHIHNGVLKNINSTAQHSKT 418
           PIY+T+     G+ +  NG LK+ NS + +  T
Sbjct: 220 PIYLTLYGTSNGADYDRNGCLKSYNSLSSYHNT 252


>09_03_0127 + 12573429-12574857,12575269-12575903
          Length = 687

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 470 ICVLPGPALAIVTYI-GCTCVHIELGHKHKRKVRDEWVGFVAELRGPLVHEXARG 631
           + V  G  LAIV  +  C C+          +VR+  +GF+ EL G    E ARG
Sbjct: 6   VVVFAGRVLAIVALLLACCCMAAAAQGGEGARVRESLIGFLTELAGG-DKERARG 59


>05_01_0327 -
           2565574-2565654,2566037-2566099,2566511-2566591,
           2566710-2566787,2566892-2566984,2567108-2567225,
           2567568-2567695,2567808-2568083,2568763-2568917,
           2568997-2569140,2569427-2569844
          Length = 544

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = -2

Query: 431 STARQIAASLPA-KKNRGKLENCIQQGLAELG*PGHPDLRGEPAAQALRTPTLSITFTCN 255
           S   Q AAS    KKNRG   N +  G  E G PG      E   +  R P       C+
Sbjct: 33  SPGSQSAASTERRKKNRGSKRN-LSDGSGEDGRPGKKINLEEEELEEERMPLEDEASACS 91

Query: 254 SCYNQIFNTY 225
           SC + +   Y
Sbjct: 92  SCSSPLCEPY 101


>06_01_1096 -
           8988463-8989167,8989335-8989361,8989560-8989648,
           8989830-8990039,8990877-8991047,8991595-8991777,
           8991886-8991969,8992067-8992178
          Length = 526

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 409 HHFLQKKIEESWKIVFSKA*PN*GDPGILIFGASLPHKHYA 287
           HH LQ++    W +  S A P+   P  L   A+ P K+YA
Sbjct: 366 HHHLQQQRANPWPVQESYAIPHDETPPPLDMRAATPRKNYA 406


>03_05_0264 -
           22510997-22511012,22511641-22511709,22511783-22511931,
           22512235-22512330,22512853-22512981,22513216-22513494,
           22513983-22514069
          Length = 274

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 283 GVRSACAAGSPRRSGCPGHPSSAR 354
           G R  C  G PRR G P H  + R
Sbjct: 43  GCRRGCRRGGPRRGGAPAHLRAPR 66


>03_04_0020 -
           16504322-16504654,16504758-16504785,16504937-16504989,
           16505377-16505463,16505636-16505704,16506071-16506145,
           16507040-16507210,16507693-16507793,16508062-16508139,
           16508492-16508648,16508737-16509006,16509369-16509485,
           16510250-16510339,16510417-16510629,16510742-16510891,
           16511929-16512342
          Length = 801

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +1

Query: 409 AAICLAVLCGAVYI-LQYSIVDMCATRSCTCHCDI 510
           A  C A  C A  + L+      C TRSC CHC I
Sbjct: 97  AVDCAAAGCAAAEVTLRARWWVHCLTRSCDCHCRI 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,996,458
Number of Sequences: 37544
Number of extensions: 437295
Number of successful extensions: 1050
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)