BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_G09
(891 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061243-1|AAL28791.1| 249|Drosophila melanogaster LD18367p pro... 46 9e-05
AE014297-1008|AAO41529.1| 249|Drosophila melanogaster CG32939-P... 46 9e-05
AE014297-1002|AAG22138.1| 249|Drosophila melanogaster CG18542-P... 46 9e-05
BT025858-1|ABF85758.1| 592|Drosophila melanogaster IP15543p pro... 31 1.6
AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p pro... 29 6.5
AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA... 29 6.5
AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA ... 29 8.6
>AY061243-1|AAL28791.1| 249|Drosophila melanogaster LD18367p
protein.
Length = 249
Score = 45.6 bits (103), Expect = 9e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 293 VLVRQARPEDQDARVTLVRLGLAEYNFPAFLYFFLQEVMLQFVLLCCAVLFIFFSTPLWI 472
+++R +D+ LVR + ++ +F + +E+ LQF+++ A+ FIF PL
Sbjct: 5 IVIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVITWAIFFIFLGVPLLF 64
Query: 473 CVLPGPALAIVTYIG 517
C L PA + G
Sbjct: 65 CALTVPACIFCLFTG 79
>AE014297-1008|AAO41529.1| 249|Drosophila melanogaster CG32939-PA
protein.
Length = 249
Score = 45.6 bits (103), Expect = 9e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 293 VLVRQARPEDQDARVTLVRLGLAEYNFPAFLYFFLQEVMLQFVLLCCAVLFIFFSTPLWI 472
+++R +D+ LVR + ++ +F + +E+ LQF+++ A+ FIF PL
Sbjct: 5 IVIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVITWAIFFIFLGVPLLF 64
Query: 473 CVLPGPALAIVTYIG 517
C L PA + G
Sbjct: 65 CALTVPACIFCLFTG 79
>AE014297-1002|AAG22138.1| 249|Drosophila melanogaster CG18542-PA
protein.
Length = 249
Score = 45.6 bits (103), Expect = 9e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 293 VLVRQARPEDQDARVTLVRLGLAEYNFPAFLYFFLQEVMLQFVLLCCAVLFIFFSTPLWI 472
+++R +D+ LVR + ++ +F + +E+ LQF+++ A+ FIF PL
Sbjct: 5 IVIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVITWAIFFIFLGVPLLF 64
Query: 473 CVLPGPALAIVTYIG 517
C L PA + G
Sbjct: 65 CALTVPACIFCLFTG 79
>BT025858-1|ABF85758.1| 592|Drosophila melanogaster IP15543p
protein.
Length = 592
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +2
Query: 401 EVMLQFVLLCCAVLFIFFSTPLWICVLPGPALAIVTYIGCTCVHIELGHKHKRKVRD 571
+VM+ + +C + F++PL++CV P +++++ + TC H+R V +
Sbjct: 507 KVMMSLLCVCILRTSVLFASPLYVCV-PHVRMSLLSPVVVTCKTFSSTSLHRRFVSE 562
>AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p
protein.
Length = 1071
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 432 VRCCLYSSVLHCGYVCYQVLH 494
+ CC YSS HC + C +LH
Sbjct: 284 IPCCEYSSKEHCRHTCRNLLH 304
>AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA
protein.
Length = 1071
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 432 VRCCLYSSVLHCGYVCYQVLH 494
+ CC YSS HC + C +LH
Sbjct: 284 IPCCEYSSKEHCRHTCRNLLH 304
>AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA
protein.
Length = 753
Score = 29.1 bits (62), Expect = 8.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 480 STHIHNGVLKNINSTAQHSKTNCSITSCKKK*RKAGK 370
+TH HN N N + ++ ++CS+ KKK ++ G+
Sbjct: 620 TTHNHNHQNHNHNHSNDNNSSSCSLFQSKKKRKRCGE 656
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,915,120
Number of Sequences: 53049
Number of extensions: 735305
Number of successful extensions: 2095
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2093
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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