Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_G09
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 30 2.6
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 30 2.6
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 30 2.6
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL032623-15|CAJ76975.1| 260|Caenorhabditis elegans Hypothetical... 30 2.6
AL032623-2|CAD54165.1| 312|Caenorhabditis elegans Hypothetical ... 30 2.6
AL032623-1|CAA21508.2| 309|Caenorhabditis elegans Hypothetical ... 30 2.6
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 29 5.9
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.9
AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical ... 29 5.9
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 396 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 479
CR+ C C +CC RCC CG C
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 125
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 396 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 479
CR+ C C +CC RCC CG C
Sbjct: 95 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 123
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 396 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 479
CR+ C C +CC RCC CG C
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 396 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 479
CR+ C C +CC RCC CG C
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 396 CRK*C-CNLSCCAVRCCLYSSVLHCGYVC 479
CR+ C C +CC RCC CG C
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCGC 125
>AL032623-15|CAJ76975.1| 260|Caenorhabditis elegans Hypothetical
protein Y43F8B.1c protein.
Length = 260
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 466 QWSTEEYKQHRTAQQDKLQHHFLQKKIEESW 374
QW E + H Q + LQ H KK+E W
Sbjct: 188 QWPPPEAEAHEREQVEVLQKHIPTKKMERQW 218
>AL032623-2|CAD54165.1| 312|Caenorhabditis elegans Hypothetical
protein Y43F8B.1b protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 466 QWSTEEYKQHRTAQQDKLQHHFLQKKIEESW 374
QW E + H Q + LQ H KK+E W
Sbjct: 237 QWPPPEAEAHEREQVEVLQKHIPTKKMERQW 267
>AL032623-1|CAA21508.2| 309|Caenorhabditis elegans Hypothetical
protein Y43F8B.1a protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 466 QWSTEEYKQHRTAQQDKLQHHFLQKKIEESW 374
QW E + H Q + LQ H KK+E W
Sbjct: 237 QWPPPEAEAHEREQVEVLQKHIPTKKMERQW 267
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Frame = +2
Query: 365 YNFPAFLYFFLQEVMLQFVLLC-----CAVLFI---FFSTPLWICVLPGPALAIVTYIGC 520
Y+ +LY Q++++Q V+LC A +++ FF +P WI ++ +A GC
Sbjct: 228 YSTSMWLYRSKQQIVIQAVILCSFHAVAAYIYVYMQFFPSPPWIIII--GQMAWQWSNGC 285
Query: 521 TCV 529
C+
Sbjct: 286 VCI 288
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 273 YHFYMQLMLQPDIQHVLGIIY*LH*TIAFSINYIY 169
++++M D+QH+L IIY + T+ F+ + +Y
Sbjct: 397 FYYFMCAYAHRDLQHILMIIYGIFTTLLFTSSTVY 431
>AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical
protein Y71G12B.23b protein.
Length = 537
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 273 YHFYMQLMLQPDIQHVLGIIY*LH*TIAFSINYIY 169
++++M D+QH+L IIY + T+ F+ + +Y
Sbjct: 397 FYYFMCAYAHRDLQHILMIIYGIFTTLLFTSSTVY 431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,514,314
Number of Sequences: 27780
Number of extensions: 373756
Number of successful extensions: 1316
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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