Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_G07
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0515 - 29959149-29959253,29959510-29959633,29959702-299597...    29   3.7  
06_01_0961 - 7389515-7389945,7390840-7391107,7391582-7391707           29   4.9  
06_03_0669 + 23321168-23321438,23321517-23321740,23321847-233220...    28   8.5  

>01_06_0515 -
           29959149-29959253,29959510-29959633,29959702-29959793,
           29959921-29960003,29960573-29960654,29960707-29960784,
           29960875-29960967,29961647-29961734,29961822-29961991
          Length = 304

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 339 RHEIK*TACSN*GNKLQVRRFCXPTGTCDG 250
           RHE++   CS  G + +VR+ C   G C G
Sbjct: 101 RHEVQQVICSLCGTEQEVRQVCISCGVCMG 130


>06_01_0961 - 7389515-7389945,7390840-7391107,7391582-7391707
          Length = 274

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 297 KLQVRRFCXPTGTCDGSCGXLRRAPLTKRAWXXXGLMC 184
           ++Q+RR C  +G  DG      +APL    W   GL+C
Sbjct: 121 QVQLRRGCSGSGEADGGSTTSSKAPLL--LWLNGGLVC 156


>06_03_0669 +
           23321168-23321438,23321517-23321740,23321847-23322094,
           23322193-23322595,23322698-23323165
          Length = 537

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +2

Query: 158 LWGRXPXAXHINPXXXQARFVSGARRRXPQLPSHVPVGLQNR 283
           LWG  P A   NP    ARF SGA R      + +P GL +R
Sbjct: 442 LWG--PDAAQFNP----ARFASGAARAAKHPLAFIPFGLGSR 477


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,699,140
Number of Sequences: 37544
Number of extensions: 284141
Number of successful extensions: 483
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)