Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_G07
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 42 8e-04
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 42 8e-04
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 39 0.005
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 39 0.005
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 36 0.050
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 36 0.050
AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical ... 29 4.4
Z68117-1|CAA92181.2| 459|Caenorhabditis elegans Hypothetical pr... 29 5.8
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 216 SLVVLGXGFHNYHHTFPWXYKTAELGAYSLNLSKLFI*F 332
S+ +G G HNYHHTFP Y+T+E + LN +++ I F
Sbjct: 257 SIAAVGEGGHNYHHTFPQDYRTSEHAEF-LNWTRVLIDF 294
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/118 (25%), Positives = 41/118 (34%)
Frame = +1
Query: 58 WXXPVXPSFSVCALFRLPSLVLNLTWLVNSAAXSVGSQXXRXAHQPRXXPGPFR*WCSAX 237
W +F ALFR L+ TW +NS + VG Q HQ + +
Sbjct: 206 WGESAFIAFYTAALFRY-CFTLHATWCINSVSHWVGWQPYD--HQASSVDNLWTSIAAVG 262
Query: 238 XXXXXXXXXXXXXKPPNLELIPLI*ASCSFDFMAKIDWAYDLKTVSTDVIQKRAKRTG 411
+ L DF A I YD KT +VIQ++ K+ G
Sbjct: 263 EGGHNYHHTFPQDYRTSEHAEFLNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 216 SLVVLGXGFHNYHHTFPWXYKTAELGAYSLNLSKLFI*F 332
S+ +G G HNYHHTFP Y+T+E + LN +++ I F
Sbjct: 257 SIAAVGEGGHNYHHTFPQDYRTSEHAEF-LNWTRVLIDF 294
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/118 (25%), Positives = 41/118 (34%)
Frame = +1
Query: 58 WXXPVXPSFSVCALFRLPSLVLNLTWLVNSAAXSVGSQXXRXAHQPRXXPGPFR*WCSAX 237
W +F ALFR L+ TW +NS + VG Q HQ + +
Sbjct: 206 WGESAFIAFYTAALFRY-CFTLHATWCINSVSHWVGWQPYD--HQASSVDNLWTSIAAVG 262
Query: 238 XXXXXXXXXXXXXKPPNLELIPLI*ASCSFDFMAKIDWAYDLKTVSTDVIQKRAKRTG 411
+ L DF A I YD KT +VIQ++ K+ G
Sbjct: 263 EGGHNYHHTFPQDYRTSEHAEFLNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 183 STSTPXATRPVSLVVLGXGFHNYHHTFPWXYKTAE 287
S+ TP ++ +G G HN+HHTFP Y+T+E
Sbjct: 255 SSITPVENVFTTIAAVGEGGHNFHHTFPQDYRTSE 289
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 183 STSTPXATRPVSLVVLGXGFHNYHHTFPWXYKTAE 287
S+ TP ++ +G G HN+HHTFP Y+T+E
Sbjct: 255 SSITPVENVFTTIAAVGEGGHNFHHTFPQDYRTSE 289
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 35.5 bits (78), Expect = 0.050
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 216 SLVVLGXGFHNYHHTFPWXYKTAE 287
++V +G G HN+HHTFP Y+ +E
Sbjct: 265 TVVAVGEGGHNFHHTFPQDYRASE 288
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 35.5 bits (78), Expect = 0.050
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 216 SLVVLGXGFHNYHHTFPWXYKTAE 287
++V +G G HN+HHTFP Y+ +E
Sbjct: 265 TVVAVGEGGHNFHHTFPQDYRASE 288
>AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical
protein F33D4.4 protein.
Length = 360
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 210 PVSLVVLGXGFHNYHHTFPW 269
P+++VV G+H HH FP+
Sbjct: 249 PINMVVFNVGYHVEHHDFPY 268
>Z68117-1|CAA92181.2| 459|Caenorhabditis elegans Hypothetical
protein F45E6.3 protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 540 RKRIFNMPYLVLEHFRIDKISSISFVFSSDLPNIVSPYGMASITCP-FRSFLND 382
RK FN+ +L F I + I F+++ P + GM + P + F ND
Sbjct: 216 RKNCFNLMPNILNQFIIKIVERILFIYAKLNPGVQYVQGMNELVAPIYYVFAND 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,894,020
Number of Sequences: 27780
Number of extensions: 260038
Number of successful extensions: 459
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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