Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_F24
(953 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 130 1e-30
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 102 3e-22
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 58 7e-09
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 42 7e-04
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 40 0.003
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 39 0.005
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 38 0.011
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 37 0.018
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 37 0.018
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 36 0.032
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 35 0.099
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 35 0.099
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 35 0.099
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 35 0.099
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 34 0.13
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 34 0.13
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 34 0.13
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 34 0.17
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 33 0.30
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 33 0.40
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 32 0.70
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 32 0.70
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 32 0.70
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 31 1.2
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 31 1.2
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 31 1.2
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 31 1.2
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 31 1.2
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 31 1.2
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 30 2.8
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 30 2.8
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 30 2.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.9
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 29 6.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.6
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 28 8.6
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 130 bits (314), Expect = 1e-30
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +1
Query: 70 VAMWSWDVECDTCAICRVQVMDACLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLW 249
+A+W+WDVECDTCAICRV +M+ CLRCQ E + C VVWG+CNHSFH CCM+ W
Sbjct: 38 LAVWAWDVECDTCAICRVHLMEECLRCQSEPSAE------CYVVWGDCNHSFHHCCMTQW 91
Query: 250 VKQNNRCPLCQQEWSIQRMGK 312
++QNNRCPLCQ++W + R K
Sbjct: 92 IRQNNRCPLCQKDWVVSRTSK 112
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 102 bits (245), Expect = 3e-22
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = +1
Query: 70 VAMWSWDVECDTCAICRVQVMDACLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLW 249
VA+W+WD++ D CAICR +MD C+ CQ K +C V WG CNH+FHF C+S W
Sbjct: 32 VALWAWDIQVDNCAICRNHIMDLCIECQANQAAGL--KDECTVAWGNCNHAFHFHCISRW 89
Query: 250 VKQNNRCPLCQQEWSIQRMG 309
+K CPL +EW Q+ G
Sbjct: 90 LKTRQVCPLDNREWEFQKYG 109
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 102 bits (245), Expect = 3e-22
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = +1
Query: 70 VAMWSWDVECDTCAICRVQVMDACLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLW 249
VA+W+WD++ D CAICR +MD C+ CQ K +C V WG CNH+FHF C+S W
Sbjct: 23 VALWAWDIQVDNCAICRNHIMDLCIECQANQAAGL--KDECTVAWGNCNHAFHFHCISRW 80
Query: 250 VKQNNRCPLCQQEWSIQRMG 309
+K CPL +EW Q+ G
Sbjct: 81 LKTRQVCPLDNREWEFQKYG 100
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 58.4 bits (135), Expect = 7e-09
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = +1
Query: 79 WSW-DVECDTCAICRVQVMDACLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLWV- 252
W W DTC ICR++ AC C+ + DC +V G C H+FH C+ W+
Sbjct: 62 WKWLQGGEDTCGICRMEFESACNMCK-------FPGDDCPLVLGICRHAFHRHCIDKWIA 114
Query: 253 ----KQNNRCPLCQQEWSI 297
+ +CPLC+Q+W+I
Sbjct: 115 APTNQPRAQCPLCRQDWTI 133
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 41.9 bits (94), Expect = 7e-04
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 208 ECNHSFHFCCMSLWVKQNNRCPLCQQEWSIQRMGK 312
+CNH FH C+ W+K N CP+C+Q+ +++ K
Sbjct: 255 DCNHIFHRPCIEPWLKTKNSCPVCRQKVNMKEWKK 289
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 39.9 bits (89), Expect = 0.003
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNRCPLCQQE 288
C H FH+ C++LW++ CP C+Q+
Sbjct: 111 CKHRFHYFCLTLWLEAQQTCPTCRQK 136
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 39.1 bits (87), Expect = 0.005
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNRCPLCQQE 288
CNH FH C+ W+ N RCP+C++E
Sbjct: 451 CNHVFHPECIYKWLDINKRCPMCREE 476
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 37.9 bits (84), Expect = 0.011
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNR--CPLCQQE 288
CNHSF F C+S WV Q+ R CP+C+++
Sbjct: 85 CNHSFCFSCISEWVCQSLRPSCPMCRKD 112
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 37.1 bits (82), Expect = 0.018
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Frame = +1
Query: 160 SKKDSYGKQDCVVVWG--------ECNHSFHFCCMSLWVKQNNRCPLCQ 282
S K + G CVV W C+H FH C+ W+ Q++ CP C+
Sbjct: 325 SVKCANGDDRCVVCWELLGTSRRLPCSHQFHDWCLMWWLAQDSSCPTCR 373
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 37.1 bits (82), Expect = 0.018
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Frame = +1
Query: 160 SKKDSYGKQDCVVVWG--------ECNHSFHFCCMSLWVKQNNRCPLCQ 282
S K + G CVV W C+H FH C+ W+ Q++ CP C+
Sbjct: 325 SVKCANGDDRCVVCWELLGTSRRLPCSHQFHDWCLMWWLAQDSSCPTCR 373
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 36.3 bits (80), Expect = 0.032
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNRCPLCQ 282
C H FH C+ W+ RCPLCQ
Sbjct: 335 CGHEFHPKCVDPWLLSKRRCPLCQ 358
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 34.7 bits (76), Expect = 0.099
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 121 VQVMDACLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLWVKQNNRCPLCQQ 285
V+ D CL C E +++ C C +H+ C+S W+K N+ CP C +
Sbjct: 2101 VEEEDGCLICT-EIIEEAVETVTC----DTCTREYHYHCISRWLKINSVCPQCSR 2150
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 34.7 bits (76), Expect = 0.099
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 121 VQVMDACLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLWVKQNNRCPLCQQ 285
V+ D CL C E +++ C C +H+ C+S W+K N+ CP C +
Sbjct: 2101 VEEEDGCLICT-EIIEEAVETVTC----DTCTREYHYHCISRWLKINSVCPQCSR 2150
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 34.7 bits (76), Expect = 0.099
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNRCPLCQ 282
CNHSFH C+ W +N CP+C+
Sbjct: 276 CNHSFHARCLEQWA--DNTCPVCR 297
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 34.7 bits (76), Expect = 0.099
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 169 DSYGKQDCVVVWGECNHSFHFCCMSLWVKQNNRCPLCQQE 288
D Y QD + + C H +H C+ W+ ++ CP+C+ +
Sbjct: 232 DPYQLQDVIRLL-PCKHIYHKSCIDPWLLEHRTCPMCKND 270
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 130 MDA-CLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLWVKQNNRCPLCQQE 288
MDA C+ C+ E D+ K+ C+H FH C+ W ++ CP C+ +
Sbjct: 288 MDATCIICREEMTVDASPKRL------PCSHVFHAHCLRSWFQRQQTCPTCRTD 335
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.13
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 208 ECNHSFHFCCMSLWVKQNNRCPLCQQE 288
EC H F C+ W+ Q + CP+C+ E
Sbjct: 351 ECTHVFCKFCIETWLDQKSTCPICRAE 377
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 34.3 bits (75), Expect = 0.13
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNRCPLCQQ 285
C H+F + C+ W+K + CP+C++
Sbjct: 54 CGHTFCYSCLFDWLKSQDTCPMCRE 78
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 33.9 bits (74), Expect = 0.17
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNR-CPLCQQE 288
C H FH C+ +W+ Q + CPLC+++
Sbjct: 265 CRHVFHCNCIDVWLTQTRKICPLCKRK 291
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 33.1 bits (72), Expect = 0.30
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNRCPLCQQ 285
C H +H C+S W+ +CP C++
Sbjct: 31 CGHIYHHGCISQWIATKRQCPSCRR 55
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 32.7 bits (71), Expect = 0.40
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 208 ECNHSFHFCCMSLWVKQNNRCPLCQQ 285
EC FH C + W+ + CP C++
Sbjct: 752 ECRRRFHLKCATKWLNEKRECPTCRK 777
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 211 CNHSFHFCCMSLW--VKQNNRCPLCQQEWSIQRMGK 312
C H FH C+ W V + CP C++ +QRM K
Sbjct: 333 CGHVFHEFCIRGWVVVGKLQTCPYCKERVDLQRMFK 368
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 31.9 bits (69), Expect = 0.70
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNRCPLCQQ 285
C FH C S W K+ + CP C +
Sbjct: 157 CRRRFHLDCASQWFKEKSVCPACNR 181
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.70
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 208 ECNHSFHFCCMSLWVKQNNRCPLCQQ 285
EC FH C + W+ + CP C++
Sbjct: 459 ECRRRFHSKCATKWLNEKRECPTCRK 484
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 271 PLCQQEWSIQRMGK*STLCIKSHEIKKQICXI 366
P C+ EW++ K +T C H+ ++ IC I
Sbjct: 583 PPCEYEWTVSEWSKCTTECGHGHKTRRVICAI 614
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 271 PLCQQEWSIQRMGK*STLCIKSHEIKKQICXI 366
P C+ EW++ K +T C H+ ++ IC I
Sbjct: 583 PPCEYEWTVSEWSKCTTECGHGHKTRRVICAI 614
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 271 PLCQQEWSIQRMGK*STLCIKSHEIKKQICXI 366
P C+ EW++ K +T C H+ ++ IC I
Sbjct: 583 PPCEYEWTVSEWSKCTTECGHGHKTRRVICAI 614
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +1
Query: 91 VECDTCAICRVQVMDACLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLWVKQNNRC 270
+E C I V + A CQ + + YGKQ + ECN C M W+ + N C
Sbjct: 109 IEHQKC-ISGVLSLPASTGCQLDDNE--YGKQ-VISCKKECNSRGLICMMRTWISEQNTC 164
Query: 271 PL 276
+
Sbjct: 165 TM 166
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 31.1 bits (67), Expect = 1.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 208 ECNHSFHFCCMSLWVKQNNRCPLCQQ 285
+C FH C + W+ + CP C++
Sbjct: 1043 QCRRRFHLECATKWLNEKRECPTCRK 1068
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 31.1 bits (67), Expect = 1.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 208 ECNHSFHFCCMSLWVKQNNRCPLCQQ 285
+C FH C + W+ + CP C++
Sbjct: 1077 QCRRRFHLECATKWLNEKRECPTCRK 1102
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNRCPLC 279
C HSFH C+ W+ ++ CP C
Sbjct: 113 CMHSFHQECVDEWLMKSFTCPSC 135
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 184 QDCVVVWGECNHSFHFCCMSLWVKQNNRCPLCQ 282
+ C++ EC HS+ C+ + N +CPLC+
Sbjct: 17 EPCII---ECGHSYCRFCIESHLNINEKCPLCR 46
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +1
Query: 139 CLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLWVKQNNRCPLC 279
CL C E K+ + C+ +C +H C W K CP C
Sbjct: 519 CLVC-LEDMKEEHETLKCL----DCKRKYHTGCAQKWFKVKRICPTC 560
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 211 CNHSFHFCCMSLWVKQNNRCPLC 279
C H FH C+ W+ CPLC
Sbjct: 620 CKHYFHGPCLRKWLAVKMVCPLC 642
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 735 GXGGGXGGXFXXXKXXXPPPXXXXXXXXXXXPPPP 839
G GGG GG PPP PPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 139 CLRCQXESKKDSYGKQDCVVVWGECNHSFHFCCMSLWVKQNNRCPLC 279
CL C + K+ QD V C +H C+ W K CP C
Sbjct: 900 CLVCLEDMVKN----QDTVKC-STCKRQYHTTCVQKWFKIKRICPTC 941
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 838 GGGGXXXXXXXXXXXGGGXXFFXXXXXPPXPPPXP 734
GGGG GGG PP PPP P
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 838 GGGGXXXXXXXXXXXGGGXXFFXXXXXPPXPPPXP 734
GGGG GGG PP PPP P
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 5/29 (17%)
Frame = +1
Query: 79 WSWDVECDTCAIC-----RVQVMDACLRC 150
W WD + D C+ C RV+V CL C
Sbjct: 341 WQWDDDVDQCSNCDTSFARVKVKPHCLHC 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,049,487
Number of Sequences: 27780
Number of extensions: 287221
Number of successful extensions: 845
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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