Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F22
         (1116 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00001-1|AAA60471.1|  823|Homo sapiens CDC27 protein.                  66   3e-10
S78234-1|AAB34378.1|  824|Homo sapiens H-NUC protein.                  66   3e-10
BC011656-1|AAH11656.1|  830|Homo sapiens CDC27 protein protein.        66   3e-10
AY518321-1|AAR89911.1|  824|Homo sapiens cell division cycle 27 ...    66   3e-10

>U00001-1|AAA60471.1|  823|Homo sapiens CDC27 protein.
          Length = 823

 Score = 65.7 bits (153), Expect = 3e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +1

Query: 148 IVQEPIQVIVXDCLNNXEFENAXFLAERLYAEVGSXEAAXLLGTCXYXSGRIXEAHXXLQ 327
           ++QEP+Q  +   LN+  + +A FLAERLYAEV S EA  LL TC Y SG+  +A+  L+
Sbjct: 3   VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLK 62

Query: 328 NKTLXIXTSKVLI 366
             +      K L+
Sbjct: 63  GHSCTTPQCKYLL 75


>S78234-1|AAB34378.1|  824|Homo sapiens H-NUC protein.
          Length = 824

 Score = 65.7 bits (153), Expect = 3e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +1

Query: 148 IVQEPIQVIVXDCLNNXEFENAXFLAERLYAEVGSXEAAXLLGTCXYXSGRIXEAHXXLQ 327
           ++QEP+Q  +   LN+  + +A FLAERLYAEV S EA  LL TC Y SG+  +A+  L+
Sbjct: 3   VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLK 62

Query: 328 NKTLXIXTSKVLI 366
             +      K L+
Sbjct: 63  GHSCTTPQCKYLL 75


>BC011656-1|AAH11656.1|  830|Homo sapiens CDC27 protein protein.
          Length = 830

 Score = 65.7 bits (153), Expect = 3e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +1

Query: 148 IVQEPIQVIVXDCLNNXEFENAXFLAERLYAEVGSXEAAXLLGTCXYXSGRIXEAHXXLQ 327
           ++QEP+Q  +   LN+  + +A FLAERLYAEV S EA  LL TC Y SG+  +A+  L+
Sbjct: 3   VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLK 62

Query: 328 NKTLXIXTSKVLI 366
             +      K L+
Sbjct: 63  GHSCTTPQCKYLL 75


>AY518321-1|AAR89911.1|  824|Homo sapiens cell division cycle 27
           protein.
          Length = 824

 Score = 65.7 bits (153), Expect = 3e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +1

Query: 148 IVQEPIQVIVXDCLNNXEFENAXFLAERLYAEVGSXEAAXLLGTCXYXSGRIXEAHXXLQ 327
           ++QEP+Q  +   LN+  + +A FLAERLYAEV S EA  LL TC Y SG+  +A+  L+
Sbjct: 3   VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLK 62

Query: 328 NKTLXIXTSKVLI 366
             +      K L+
Sbjct: 63  GHSCTTPQCKYLL 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,751,067
Number of Sequences: 237096
Number of extensions: 1031465
Number of successful extensions: 959
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15479331280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)