Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_F20
(939 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.032
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.032
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.032
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.22
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.22
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.29
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.29
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.29
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.68
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.032
Identities = 24/62 (38%), Positives = 24/62 (38%)
Frame = -2
Query: 875 GGGGPQXXXXGXFXKXGGPK*XPPXKGGXPPPXGXXXXXXPPPXGGXXRXGGPFXXAPKX 696
GG P G GGP PP GG PPP PPP GG GGP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP------PPPPPPGGF--KGGPPPPPPPG 791
Query: 695 FF 690
F
Sbjct: 792 MF 793
Score = 35.9 bits (79), Expect = 0.042
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +1
Query: 721 PPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
PP PP GG P GG PP GG PP P GPPPP
Sbjct: 714 PPPPGLPPITGGP--PPPPPPGGLPPITGGPPPPPPPGGLPPISG--GPPPP 761
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 875 GGGGPQXXXXGXFXKXGGPK*XPPXKGGXPPPXGXXXXXXPPPXG 741
GG P G GGP PP GG PP G PPP G
Sbjct: 724 GGPPPPPPPGGLPPITGGPP-PPPPPGGLPPISGGPPPPPPPPGG 767
Score = 31.5 bits (68), Expect = 0.90
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = +1
Query: 697 LLGAXXNGPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
+ G PP PP GG P GG PP GG PP P PPPP
Sbjct: 722 ITGGPPPPPPPGGLPPITGGP--PPPPPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPP 777
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Frame = -2
Query: 827 GGPK*XPPXKGGXPPPXG----XXXXXXPPPXGGXXR-XGGP 717
GG PP GG PPP G PPP GG GGP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP 742
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.032
Identities = 24/62 (38%), Positives = 24/62 (38%)
Frame = -2
Query: 875 GGGGPQXXXXGXFXKXGGPK*XPPXKGGXPPPXGXXXXXXPPPXGGXXRXGGPFXXAPKX 696
GG P G GGP PP GG PPP PPP GG GGP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP------PPPPPPGGF--KGGPPPPPPPG 791
Query: 695 FF 690
F
Sbjct: 792 MF 793
Score = 35.9 bits (79), Expect = 0.042
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +1
Query: 721 PPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
PP PP GG P GG PP GG PP P GPPPP
Sbjct: 714 PPPPGLPPITGGP--PPPPPPGGLPPITGGPPPPPPPGGLPPISG--GPPPP 761
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 875 GGGGPQXXXXGXFXKXGGPK*XPPXKGGXPPPXGXXXXXXPPPXG 741
GG P G GGP PP GG PP G PPP G
Sbjct: 724 GGPPPPPPPGGLPPITGGPP-PPPPPGGLPPISGGPPPPPPPPGG 767
Score = 31.5 bits (68), Expect = 0.90
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = +1
Query: 697 LLGAXXNGPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
+ G PP PP GG P GG PP GG PP P PPPP
Sbjct: 722 ITGGPPPPPPPGGLPPITGGP--PPPPPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPP 777
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Frame = -2
Query: 827 GGPK*XPPXKGGXPPPXG----XXXXXXPPPXGGXXR-XGGP 717
GG PP GG PPP G PPP GG GGP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP 742
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.032
Identities = 24/62 (38%), Positives = 24/62 (38%)
Frame = -2
Query: 875 GGGGPQXXXXGXFXKXGGPK*XPPXKGGXPPPXGXXXXXXPPPXGGXXRXGGPFXXAPKX 696
GG P G GGP PP GG PPP PPP GG GGP P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP------PPPPPPGGF--KGGPPPPPPPG 374
Query: 695 FF 690
F
Sbjct: 375 MF 376
Score = 35.9 bits (79), Expect = 0.042
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +1
Query: 721 PPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
PP PP GG P GG PP GG PP P GPPPP
Sbjct: 297 PPPPGLPPITGGP--PPPPPPGGLPPITGGPPPPPPPGGLPPISG--GPPPP 344
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 875 GGGGPQXXXXGXFXKXGGPK*XPPXKGGXPPPXGXXXXXXPPPXG 741
GG P G GGP PP GG PP G PPP G
Sbjct: 307 GGPPPPPPPGGLPPITGGPP-PPPPPGGLPPISGGPPPPPPPPGG 350
Score = 31.5 bits (68), Expect = 0.90
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = +1
Query: 697 LLGAXXNGPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
+ G PP PP GG P GG PP GG PP P PPPP
Sbjct: 305 ITGGPPPPPPPGGLPPITGGP--PPPPPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPP 360
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Frame = -2
Query: 827 GGPK*XPPXKGGXPPPXG----XXXXXXPPPXGGXXR-XGGP 717
GG PP GG PPP G PPP GG GGP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP 325
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = -2
Query: 875 GGGGPQXXXXGXFXKXG-GPK*XPPXKGGXPPPXGXXXXXXPPP-XGGXXRXGGP 717
GGG P+ G G G PP GG P G PPP GG GGP
Sbjct: 160 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 214
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 718 GPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPP---XXXKXPFXXXWGPPPP 876
GPP P GGG P G G PP GG GPP P G PPP
Sbjct: 153 GPP----PLMGGGGDPRGPPGGMGGPPGHGG-MGGPPGHGGQGGPPGHGGMGGPPP 203
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 703 GAXXNGPPX-LXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXP 846
G GPP + PP GG G G PP GG GPP P
Sbjct: 161 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGG-MGGPPPGQGGP 208
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = -2
Query: 875 GGGGPQXXXXGXFXKXG-GPK*XPPXKGGXPPPXGXXXXXXPPP-XGGXXRXGGP 717
GGG P+ G G G PP GG P G PPP GG GGP
Sbjct: 440 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 494
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 718 GPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPP---XXXKXPFXXXWGPPPP 876
GPP P GGG P G G PP GG GPP P G PPP
Sbjct: 433 GPP----PLMGGGGDPRGPPGGMGGPPGHGG-MGGPPGHGGQGGPPGHGGMGGPPP 483
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 703 GAXXNGPPX-LXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXP 846
G GPP + PP GG G G PP GG GPP P
Sbjct: 441 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGG-MGGPPPGQGGP 488
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +1
Query: 703 GAXXNGPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
G+ PP PP G P G PP G PP P PPPP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 722 PXPXPXPXGGGXXXXXTPPXAGXXPLXXXGXIXAPPPXKK 841
P P P P G PP AG P PPP +K
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQK 336
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 809 PPXKGGXPPPXGXXXXXXPPPXGGXXRXG 723
PP GG PPP PPP G G
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +1
Query: 703 GAXXNGPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
G+ PP PP G P G PP G PP P PPPP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 722 PXPXPXPXGGGXXXXXTPPXAGXXPLXXXGXIXAPPPXKK 841
P P P P G PP AG P PPP +K
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQK 357
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 809 PPXKGGXPPPXGXXXXXXPPPXGGXXRXG 723
PP GG PPP PPP G G
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +1
Query: 703 GAXXNGPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
G+ PP PP G P G PP G PP P PPPP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 722 PXPXPXPXGGGXXXXXTPPXAGXXPLXXXGXIXAPPPXKK 841
P P P P G PP AG P PPP +K
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQK 342
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 809 PPXKGGXPPPXGXXXXXXPPPXGGXXRXG 723
PP GG PPP PPP G G
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -2
Query: 869 GGPQXXXXGXFXKXGGPK*XPPXKGGXPPPXGXXXXXXPPPXGG 738
GGP G + GP PP GG PP G PPP GG
Sbjct: 1571 GGPPPPRGGSHCQ--GP---PPLMGGPPPRLGMPPPGPPPPNGG 1609
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = +1
Query: 718 GPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPP 873
GPP PP GG + GG PP G GPP P PPP
Sbjct: 1553 GPPMGGLPPPHGG---MNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPP 1601
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = +1
Query: 718 GPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
GPP PP GG P GG PP G GPP GPPPP
Sbjct: 1572 GPP----PPRGGSHCQGPPPLMGGPPPRLGMPPPGPP-------PPNGGPPPP 1613
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = -2
Query: 884 FKXGGGGPQXXXXGXFXKXGGPK*XPPXKGGXPPPXG---XXXXXXPPPXGGXXRXGGP 717
F GGGP + P+ P GG PPP G PPP GG G P
Sbjct: 1530 FPQRGGGPGMGPSQYYHD--SPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPP 1586
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/98 (26%), Positives = 30/98 (30%), Gaps = 1/98 (1%)
Frame = +2
Query: 587 PPXFXGXXPPFFPFFXXKXFXPXXXPGXKXXXXXXKXFWGXXKMXPXPXPXPXGGGXXXX 766
PP G PP P + P PG + +G M P P P G
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR--FGPPGMGGMPPPPPPGMRYPGG 346
Query: 767 XTPPXAGXXPLXXXGXIXAPPPXK-KXXXXXFGAHPPP 877
PP P G PPP + G PPP
Sbjct: 347 MPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/98 (26%), Positives = 30/98 (30%), Gaps = 1/98 (1%)
Frame = +2
Query: 587 PPXFXGXXPPFFPFFXXKXFXPXXXPGXKXXXXXXKXFWGXXKMXPXPXPXPXGGGXXXX 766
PP G PP P + P PG + +G M P P P G
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR--FGPPGMGGMPPPPPPGMRYPGG 356
Query: 767 XTPPXAGXXPLXXXGXIXAPPPXK-KXXXXXFGAHPPP 877
PP P G PPP + G PPP
Sbjct: 357 MPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = -2
Query: 827 GGPK*X-PPXKGGX----PPPXGXXXXXXPPPXGGXXRXGGPFXXAP 702
GGP PP GG PPP G PPP G PF P
Sbjct: 428 GGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARGP 474
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +1
Query: 718 GPPXLXXPPXGGGXFXLXXPXGGGXPPFXGGXYXGPPXXXKXPFXXXWGPPPP 876
G P PP GG P G G PP G GPP P G PPP
Sbjct: 418 GAPGSYGPPQGG-------PGGFGPPPPGGPGAYGPPPTGFPPV----GAPPP 459
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,891,057
Number of Sequences: 27780
Number of extensions: 196184
Number of successful extensions: 632
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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