Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F17
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   4.0  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   9.2  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = -3

Query: 349  HYISRLLDRQLHDDLCYRLPLVPSTNLNVS*TLYSTLYVRTTSLK*NVIIL 197
            H++S++L   L +D+ +RL L    +LN +  L  T+     S K  +++L
Sbjct: 1087 HFVSQILTSTLENDIGFRLCL-HYRDLNANAYLADTIVEAVESSKRAILVL 1136


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = -2

Query: 377  DTLFIFQRPSLYI--KAIGSPVT*RLVLPSSSCSQHESKRKLDIVFNFICTNNKFKIKCY 204
            D+  +  R  +Y   + + S  T RL  P SS  + +   ++  VFN +     F I   
Sbjct: 977  DSSPLLHRVDIYAPSRTLRSRETLRLAQPRSSAGRSDPMFRMSAVFNTVSDCFDFDISTQ 1036

Query: 203  NFNIQV*LVPF 171
             F  ++ L+P+
Sbjct: 1037 CFKERLRLLPW 1047


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 194 IQV*LVPFSILVFYRAYTILSTW 126
           I V +VPF+I+V     T L+ W
Sbjct: 290 ILVFVVPFTIIVVLNTITALTVW 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,541
Number of Sequences: 2352
Number of extensions: 17623
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)