Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_F16
(953 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 41 3e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.026
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.034
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.059
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.14
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.18
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.3
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.7
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 5.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 5.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 6.8
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 9.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 40.7 bits (91), Expect = 3e-04
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = +3
Query: 645 PPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPPPPPXNXNPXXXPXXRGX 824
P P P K PP P P E P PP P P P P
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPA-PSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAP 1102
Query: 825 AXPPPRXKKXTXPXPPXXXPPPXPXXAXP 911
P P P P P P P A P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Score = 34.3 bits (75), Expect = 0.026
Identities = 21/87 (24%), Positives = 26/87 (29%), Gaps = 3/87 (3%)
Frame = +3
Query: 645 PPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXP---PPPPPXNXNPXXXPXX 815
P P P K + P + P + PP P PP P + P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 816 RGXAXPPPRXKKXTXPXPPXXXPPPXP 896
P P+ P PP PP P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 32.7 bits (71), Expect = 0.078
Identities = 24/105 (22%), Positives = 27/105 (25%), Gaps = 5/105 (4%)
Frame = +3
Query: 645 PPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXP-----PPPPPXNXNPXXXP 809
P P P K + P + P + PP P P P P P P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 810 XXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXXXPXPP 944
P P P P P P P P PP
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 32.3 bits (70), Expect = 0.10
Identities = 26/100 (26%), Positives = 29/100 (29%), Gaps = 1/100 (1%)
Frame = +3
Query: 645 PPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPPPPPXNXNPXXXPXXRGX 824
P P G P + PP P P + P PP PPP P P
Sbjct: 1172 PAPSSGIPPVPKPAAGV--PPVPP--PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Query: 825 AXPPPRXKKXTXPXPPXXXPP-PXPXXAXPXXXXXXXPXP 941
P P K P P P P + P P P
Sbjct: 1228 PVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 30.7 bits (66), Expect = 0.32
Identities = 24/108 (22%), Positives = 25/108 (23%), Gaps = 5/108 (4%)
Frame = +3
Query: 645 PPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXP-----PPPPPXNXNPXXXP 809
P P P P + P PP P P P P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 810 XXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXXXPXPPFXP 953
P P P P PP P P PP P
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 29.1 bits (62), Expect = 0.97
Identities = 28/108 (25%), Positives = 33/108 (30%), Gaps = 8/108 (7%)
Frame = +3
Query: 606 PEKXPPXXGFFXRPPPPX----GXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXP-- 767
P PP PP P P K + P + P + PP P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 768 -PPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXP-PXXXPPPXPXXA 905
PP P + P G A P P+ P P P PP P A
Sbjct: 1139 APPVPKPSVAAPPVPAPSG-APPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 5/69 (7%)
Frame = +3
Query: 606 PEKXPPXXGFFXRPPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPP-----XKXPP 770
P P G PPP P K PP + P PP K PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 771 PPPPXNXNP 797
P P + P
Sbjct: 1239 VPAPSSEAP 1247
Score = 28.3 bits (60), Expect = 1.7
Identities = 26/122 (21%), Positives = 29/122 (23%)
Frame = +3
Query: 546 ESXPXPRKXHVTKRPXKGRXPEKXPPXXGFFXRPPPPXGXPXQKXXXSXXXXPPKTPXRP 725
++ P P P P G PPP + P P P
Sbjct: 1030 DAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPA-P 1088
Query: 726 XKEXXXXXPPXKXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXA 905
P PP P P P P P P P P P P A
Sbjct: 1089 SGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVA 1148
Query: 906 XP 911
P
Sbjct: 1149 AP 1150
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/70 (27%), Positives = 19/70 (27%), Gaps = 1/70 (1%)
Frame = +3
Query: 705 PKTPXRPXKEXXXXXPPXKXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXP 884
P P P PP P P P P P P P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV-PKPSVAAP 1150
Query: 885 P-PXPXXAXP 911
P P P A P
Sbjct: 1151 PVPAPSGAPP 1160
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/90 (20%), Positives = 21/90 (23%)
Frame = +3
Query: 642 RPPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPPPPPXNXNPXXXPXXRG 821
RP P P + P P + P P P P +
Sbjct: 962 RPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKA 1021
Query: 822 XAXPPPRXKKXTXPXPPXXXPPPXPXXAXP 911
P P P P P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPP 1051
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.026
Identities = 30/125 (24%), Positives = 34/125 (27%), Gaps = 6/125 (4%)
Frame = +3
Query: 588 PXKGRXPEKXPPXXGFFXRPPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXP 767
P R K P G PP P + PP+ P P
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ 375
Query: 768 PPP----PPXNXNPXXXPXXRGXAXP--PPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXX 929
PPP + P P G + P PP PP PP P A P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 930 XPXPP 944
P P
Sbjct: 436 PPSLP 440
Score = 33.9 bits (74), Expect = 0.034
Identities = 27/106 (25%), Positives = 32/106 (30%), Gaps = 7/106 (6%)
Frame = +3
Query: 600 RXPEKXPPXXGFFXRPPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPPPP 779
R PE+ P PPP P S PP+ P P K P PPP
Sbjct: 240 RPPERVPSLSA---PAPPPIPPPSNGTVSSPPNSPPR-PIAPVSMNPAINSTSKPPLPPP 295
Query: 780 PXNXNPXXXPXXRGXAXPPPRXKKXTXPXPP-------XXXPPPXP 896
+ + PPP + PP PPP P
Sbjct: 296 SSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Score = 33.5 bits (73), Expect = 0.045
Identities = 29/103 (28%), Positives = 32/103 (31%)
Frame = +3
Query: 645 PPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPPPPPXNXNPXXXPXXRGX 824
PPPP P + + PP + R PP PPP P P P G
Sbjct: 361 PPPP---PPRSAPSTGRQPPPLSSSRAVSN-----PPA--PPPAIPGRSAPALPPL--GN 408
Query: 825 AXPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXXXPXPPFXP 953
A T P P PP P A P PP P
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 32.7 bits (71), Expect = 0.078
Identities = 30/106 (28%), Positives = 32/106 (30%)
Frame = +3
Query: 594 KGRXPEKXPPXXGFFXRPPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPP 773
K R P PP R PP G + PP P R PP P
Sbjct: 308 KKRPPPPPPPSRR--NRGKPPIG----NGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAP 361
Query: 774 PPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXP 911
PPP P P PPP PP PP P + P
Sbjct: 362 PPPP---PRSAPST--GRQPPPLSSSRAVSNPP-APPPAIPGRSAP 401
Score = 31.1 bits (67), Expect = 0.24
Identities = 33/127 (25%), Positives = 37/127 (29%), Gaps = 5/127 (3%)
Frame = +3
Query: 588 PXKGRXPEKXPPXXGF--FXRPPPPXGXPXQKXXXSXXXXPPKTPXR--PXKEXXXXXPP 755
P +GR PP R PPP + + PP P R P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSS--SRAVSNPPAPPPAIPGRSAPALPPLGNASR 411
Query: 756 XKXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXP-XXAXPXXXXXXX 932
PP P P + P P A PP PP PP P P
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSA--PPSLPMGAPAAPP--LPPSAPIAPPLPAGMPAAP 467
Query: 933 PXPPFXP 953
P PP P
Sbjct: 468 PLPPAAP 474
Score = 29.9 bits (64), Expect = 0.55
Identities = 28/119 (23%), Positives = 30/119 (25%), Gaps = 1/119 (0%)
Frame = +3
Query: 588 PXKGRXPEKXPPXXGFFXRPPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXP 767
P GR P P PP P + S PP PP P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGR----SAPALPPLGNASRTSTPPVPTPPSLPP 425
Query: 768 PPPPPXNXN-PXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXXXPXP 941
PP + P P A P P P P P A P P P
Sbjct: 426 SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.1 bits (62), Expect = 0.97
Identities = 26/104 (25%), Positives = 27/104 (25%), Gaps = 2/104 (1%)
Frame = +3
Query: 606 PEKXPPXXGFFXRPPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXP--PXKXPPPPP 779
P P G PP G + P P P P P P PP
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 780 PXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXP 911
P P G PP P P P P P A P
Sbjct: 449 LPPSAPIAPPLPAGMPAAPP-----LPPAAPAPPPAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +2
Query: 815 PGXGXPPPPXKKXHXPXXPPXXPPPXP 895
P G PPP PP PP P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIP 396
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.034
Identities = 23/62 (37%), Positives = 23/62 (37%)
Frame = +3
Query: 759 KXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXXXPX 938
K PPPPPP P P PPP P PP PPP A P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAP--IPVPPPAPIMGGPPPPP---PPPGVAGAGP---PPPPPP 781
Query: 939 PP 944
PP
Sbjct: 782 PP 783
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 750 PPXKXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPP 890
P P P P P P G PPP PP PPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/60 (28%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Frame = +1
Query: 754 LXNXPPRPPXXTXTXPXXPXTXXXXXXXXXKKXXPXPXPPXXX---PPPPPXXPXRXXXG 924
L + PP PP P P P PP PPPPP P G
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.059
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +3
Query: 792 NPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXXXPXP 941
+P P R + PP+ T P PP PPP P P P
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +3
Query: 750 PPXKXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXP 911
PP + PP P P + PPP PP PPP P + P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPM--SVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 856 PXPXPPXXXPPPPPXXPXRXXXGXXSPXP 942
P P PP PPPP P +P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.2 bits (55), Expect = 6.8
Identities = 16/60 (26%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Frame = +3
Query: 645 PP--PPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPPPPPXNXNPXXXPXXR 818
PP P P Q + P P P PP PPP P + P R
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 862 PXPPXXXPPPPPXXPXRXXXGXXSPXPL 945
P PP PPPP P P PL
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 815 PGXGXPPPPXKKXHXPXXPPXXPPP 889
PG PPPP P PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.42
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 750 PPXKXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXP 869
PP PPPPPP P P PP KK P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP---PPPPPGYVKKRKNKTP 41
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 815 PGXGXPPPPXKKXHXPXXPPXXPPP 889
P PPPP P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.18
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Frame = +3
Query: 702 PPKTPXRPXKEXXXXXPPXKXPPPPPPXNXNPXXXPXXRGXAXP-PPRXKKXTXPXPPXX 878
PP P P + PP PP P +P P A P P P P
Sbjct: 124 PPSAPAPPTPQ-SELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 879 XPPPXP--XXAXPXXXXXXXPXP 941
PP P A P P P
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPP 205
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = +3
Query: 606 PEKXPPXXGFFXRPPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPPPPPX 785
P PP PP P P + PP P P PP PPPP
Sbjct: 154 PASAPPIPS--KAPPIPSSLPPPAQPAAPVKSPPSAPSLPSA-----VPPMPPKVPPPPL 206
Query: 786 NXNPXXXPXXRGXAXPPP 839
+ P R + PP
Sbjct: 207 SQAPVANTSSRPSSFAPP 224
Score = 29.5 bits (63), Expect = 0.73
Identities = 17/68 (25%), Positives = 17/68 (25%)
Frame = +3
Query: 750 PPXKXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXX 929
PP PP P P R PP P P P A P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 930 XPXPPFXP 953
P P P
Sbjct: 184 PPSAPSLP 191
Score = 29.1 bits (62), Expect = 0.97
Identities = 20/81 (24%), Positives = 22/81 (27%), Gaps = 2/81 (2%)
Frame = +3
Query: 654 PXGXPXQKXXXSXXXXPPKTPXRPX--KEXXXXXPPXKXPPPPPPXNXNPXXXPXXRGXA 827
P P S P P RP PP PP P + P P +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 828 XPPPRXKKXTXPXPPXXXPPP 890
P P P PPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +3
Query: 645 PPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPPP-PPXN 788
PPPP P Q S P + + PP PP PP N
Sbjct: 240 PPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTN 288
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 844 KKXXPXPXPPXXXPPPPPXXPXRXXXGXXSPXP 942
K+ P P PP PPPPP P + P P
Sbjct: 230 KQADPLPAPP---PPPPPTLPPQSTNTSQLPMP 259
Score = 26.2 bits (55), Expect = 6.8
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +3
Query: 750 PPXKXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXX 929
P PPPPPP P A P P P P A P
Sbjct: 184 PSDYNPPPPPPP---PPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPP 240
Query: 930 XPXPPFXP 953
P P P
Sbjct: 241 PPPPTLPP 248
Score = 25.8 bits (54), Expect = 9.0
Identities = 22/97 (22%), Positives = 28/97 (28%), Gaps = 8/97 (8%)
Frame = +3
Query: 645 PPPPXGXPXQKXXXSXXXXPPK--------TPXRPXKEXXXXXPPXKXPPPPPPXNXNPX 800
PPPP P + + P +P P P PPPPPP P
Sbjct: 190 PPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPP----PT 245
Query: 801 XXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXP 911
P + P + PPP + P
Sbjct: 246 LPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.3
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = -2
Query: 952 GXKGGXGXXXXXXXGXAXXGXGGGXXXGGXGXVXFFXRGGGXAXPRXXGXXXGFXFXGGG 773
G +GG G G G G GG G RGG G G G
Sbjct: 6 GSRGGRGGSRG---GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Query: 772 GGGXFXGGXXXXXSXWGRXGVF 707
G G GG GVF
Sbjct: 63 GRGGAKGGAKVIIEPHRHAGVF 84
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.7
Identities = 24/68 (35%), Positives = 24/68 (35%)
Frame = -2
Query: 952 GXKGGXGXXXXXXXGXAXXGXGGGXXXGGXGXVXFFXRGGGXAXPRXXGXXXGFXFXGGG 773
G GG G G G G G GG G GGG G GF GG
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF-----GGGPGG--FGGGLGGF----GG 256
Query: 772 GGGXFXGG 749
G G F GG
Sbjct: 257 GPGGFGGG 264
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +3
Query: 759 KXPPPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPP 887
K PPPPP N P + PP + ++ P PP
Sbjct: 203 KAQPPPPPPQQN---YPPAASSSAPPMQYQQTAYPPQQAPYPP 242
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 5.1
Identities = 25/122 (20%), Positives = 30/122 (24%)
Frame = +3
Query: 588 PXKGRXPEKXPPXXGFFXRPPPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXP 767
P G+ P + R P P Q S P P P
Sbjct: 866 PMLGQLPMRRAAPSMAPVRSPFPGASSAQPAAMSRTSSVSTLPPPPPTASMTASAPAIAS 925
Query: 768 PPPPPXNXNPXXXPXXRGXAXPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXXXPXPPF 947
PPPP P G PP + P P P + P P+
Sbjct: 926 PPPPKV-GETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNPY 984
Query: 948 XP 953
P
Sbjct: 985 TP 986
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -2
Query: 952 GXKGGXGXXXXXXXGXAXXGXGGGXXXGGXGXVXFFXRGG 833
G +GG G G + G GGG G G RGG
Sbjct: 142 GFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 9.0
Identities = 23/102 (22%), Positives = 24/102 (23%)
Frame = +3
Query: 648 PPPXGXPXQKXXXSXXXXPPKTPXRPXKEXXXXXPPXKXPPPPPPXNXNPXXXPXXRGXA 827
P P P S PP P P P P P P +
Sbjct: 515 PQPPAAPVVPEAPSVHQ-PPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALS 573
Query: 828 XPPPRXKKXTXPXPPXXXPPPXPXXAXPXXXXXXXPXPPFXP 953
P P P P P P A P PP P
Sbjct: 574 VPQP----PVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.143 0.481
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,807,484
Number of Sequences: 5004
Number of extensions: 25209
Number of successful extensions: 256
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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