Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F15
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0018 + 14164103-14164225,14164596-14164892                       38   0.008
03_01_0433 + 3353255-3353374,3353532-3353828                           38   0.008
12_01_0784 + 7167051-7167509,7168161-7168276,7168788-7169646           29   6.8  

>10_08_0018 + 14164103-14164225,14164596-14164892
          Length = 139

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = +1

Query: 466 KQLIAGGGVIPHIHKSLIGK 525
           K  IAGGGVIPHIHKSLI K
Sbjct: 116 KGTIAGGGVIPHIHKSLINK 135


>03_01_0433 + 3353255-3353374,3353532-3353828
          Length = 138

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = +1

Query: 466 KQLIAGGGVIPHIHKSLIGK 525
           K  IAGGGVIPHIHKSLI K
Sbjct: 115 KGTIAGGGVIPHIHKSLINK 134


>12_01_0784 + 7167051-7167509,7168161-7168276,7168788-7169646
          Length = 477

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 526 ERRSWCTRLILSYENDKIILHLIPAVVTHLHKSSPRLVNIVFY*NNISEVDSGVTGTVGP 705
           +RR W    +   E  KIIL ++P  +T +    P  + + F       +D+ + GT  P
Sbjct: 203 DRRRWSACTVTQVEEAKIILRMLPVFLTSVLGYVPIPLLLTFTVQQGGAMDTRLAGTSVP 262


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,301,939
Number of Sequences: 37544
Number of extensions: 342890
Number of successful extensions: 542
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)