Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_F12
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81084-6|CAB03110.1| 176|Caenorhabditis elegans Hypothetical pr... 131 7e-31
Z81072-16|CAB03027.1| 176|Caenorhabditis elegans Hypothetical p... 131 7e-31
AF440505-1|AAL34093.1| 170|Caenorhabditis elegans SKR-1 protein. 131 7e-31
Z81084-3|CAB03108.1| 174|Caenorhabditis elegans Hypothetical pr... 117 1e-26
AF440506-1|AAL34094.1| 174|Caenorhabditis elegans SKR-2 protein. 117 1e-26
Z83109-7|CAB05516.1| 167|Caenorhabditis elegans Hypothetical pr... 105 4e-23
AF440507-1|AAL34095.1| 167|Caenorhabditis elegans SKR-3 protein. 105 4e-23
AL117207-10|CAB60402.1| 159|Caenorhabditis elegans Hypothetical... 89 3e-18
Z92786-7|CAB07209.1| 145|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AF440508-1|AAL34096.1| 144|Caenorhabditis elegans SKR-5 protein. 83 3e-16
CU457737-5|CAM36326.1| 172|Caenorhabditis elegans Hypothetical ... 68 1e-11
AL023837-2|CAB63347.1| 199|Caenorhabditis elegans Hypothetical ... 68 1e-11
AF440514-1|AAL34102.1| 172|Caenorhabditis elegans SKR-13 protein. 68 1e-11
U60980-1|AAB17536.1| 172|Caenorhabditis elegans protein ( Caeno... 66 2e-11
CU457737-3|CAM36324.1| 172|Caenorhabditis elegans Hypothetical ... 66 2e-11
AF440513-1|AAL34101.1| 172|Caenorhabditis elegans SKR-12 protein. 66 2e-11
AF440515-1|AAL34103.1| 174|Caenorhabditis elegans SKR-14 protein. 65 7e-11
AC024790-6|AAF60635.1| 197|Caenorhabditis elegans Skp1 related ... 65 7e-11
CU457737-6|CAM36327.1| 194|Caenorhabditis elegans Hypothetical ... 63 3e-10
AF440510-1|AAL34098.1| 194|Caenorhabditis elegans SKR-8 protein. 63 3e-10
AF440509-1|AAL34097.1| 194|Caenorhabditis elegans SKR-7 protein. 62 4e-10
AC024790-7|AAF60641.1| 194|Caenorhabditis elegans Skp1 related ... 62 4e-10
CU457737-4|CAM36325.1| 194|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF440511-1|AAL34099.1| 194|Caenorhabditis elegans SKR-9 protein. 60 2e-09
AL110479-12|CAB54358.1| 192|Caenorhabditis elegans Hypothetical... 60 3e-09
AF440512-1|AAL34100.1| 192|Caenorhabditis elegans SKR-10 protein. 60 3e-09
Z93377-5|CAB07579.1| 195|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U39849-9|AAA81051.1| 180|Caenorhabditis elegans Skp1 related (u... 54 1e-07
AF440517-1|AAL34105.1| 180|Caenorhabditis elegans SKR-17 protein. 54 1e-07
U41991-2|AAA83342.2| 181|Caenorhabditis elegans Skp1 related (u... 52 5e-07
Z50755-5|CAA90636.1| 173|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AF440519-1|AAL34107.1| 173|Caenorhabditis elegans SKR-20 protein. 51 1e-06
Z50755-3|CAA90635.1| 182|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF440518-1|AAL34106.1| 155|Caenorhabditis elegans SKR-19 protein. 47 2e-05
AF440516-1|AAL34104.1| 184|Caenorhabditis elegans SKR-15 protein. 44 2e-04
AF099917-7|AAC68782.1| 184|Caenorhabditis elegans Skp1 related ... 44 2e-04
AF045646-12|AAL32222.1| 183|Caenorhabditis elegans Hypothetical... 41 0.001
Z70210-1|CAA94149.1| 176|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF440520-1|AAL34108.1| 172|Caenorhabditis elegans SKR-21 protein. 33 0.27
U63636-1|AAC47433.1| 500|Caenorhabditis elegans RNA lariat debr... 30 1.9
AC006625-2|AAK68279.2| 500|Caenorhabditis elegans Lariat debran... 30 1.9
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 29 5.7
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 29 5.7
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 29 5.7
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 29 5.7
Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical p... 29 5.7
Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical p... 29 5.7
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 29 5.7
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 28 7.6
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 28 7.6
>Z81084-6|CAB03110.1| 176|Caenorhabditis elegans Hypothetical
protein F46A9.5 protein.
Length = 176
Score = 131 bits (316), Expect = 7e-31
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ +GTLFELILAANYLDIKGLLDVTCKTVANMIKGK+PEEIR+TFNIKNDFT EE+
Sbjct: 106 FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEE 165
Query: 613 QVRKENEWCEE 645
Q+RKEN WCE+
Sbjct: 166 QIRKENAWCED 176
Score = 93.9 bits (223), Expect = 1e-19
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Frame = +3
Query: 159 KMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKK 329
K IK+ SSDNE+F+V + + S TI T P+ NV ++ILKK
Sbjct: 12 KEREIKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKK 71
Query: 330 VIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQG 452
VI W +H DP ED +N+EKRTDDI SWD +FLKVDQG
Sbjct: 72 VISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQG 112
>Z81072-16|CAB03027.1| 176|Caenorhabditis elegans Hypothetical
protein F46A9.5 protein.
Length = 176
Score = 131 bits (316), Expect = 7e-31
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ +GTLFELILAANYLDIKGLLDVTCKTVANMIKGK+PEEIR+TFNIKNDFT EE+
Sbjct: 106 FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEE 165
Query: 613 QVRKENEWCEE 645
Q+RKEN WCE+
Sbjct: 166 QIRKENAWCED 176
Score = 93.9 bits (223), Expect = 1e-19
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Frame = +3
Query: 159 KMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKK 329
K IK+ SSDNE+F+V + + S TI T P+ NV ++ILKK
Sbjct: 12 KEREIKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKK 71
Query: 330 VIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQG 452
VI W +H DP ED +N+EKRTDDI SWD +FLKVDQG
Sbjct: 72 VISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQG 112
>AF440505-1|AAL34093.1| 170|Caenorhabditis elegans SKR-1 protein.
Length = 170
Score = 131 bits (316), Expect = 7e-31
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ +GTLFELILAANYLDIKGLLDVTCKTVANMIKGK+PEEIR+TFNIKNDFT EE+
Sbjct: 100 FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEE 159
Query: 613 QVRKENEWCEE 645
Q+RKEN WCE+
Sbjct: 160 QIRKENAWCED 170
Score = 93.9 bits (223), Expect = 1e-19
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Frame = +3
Query: 159 KMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKK 329
K IK+ SSDNE+F+V + + S TI T P+ NV ++ILKK
Sbjct: 6 KEREIKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKK 65
Query: 330 VIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQG 452
VI W +H DP ED +N+EKRTDDI SWD +FLKVDQG
Sbjct: 66 VISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQG 106
>Z81084-3|CAB03108.1| 174|Caenorhabditis elegans Hypothetical
protein F46A9.4 protein.
Length = 174
Score = 117 bits (282), Expect = 1e-26
Identities = 51/71 (71%), Positives = 63/71 (88%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F + +GTLFELILAANYLDIKGLLDV C++VANMIKGK+P+EIR+ FNIK+DFTA E +
Sbjct: 104 FLDIDQGTLFELILAANYLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEERE 163
Query: 613 QVRKENEWCEE 645
Q+RKEN WC++
Sbjct: 164 QIRKENAWCDD 174
Score = 69.7 bits (163), Expect = 3e-12
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Frame = +3
Query: 135 EHSNT*KNKMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPN 305
E S KN+ IK+ SSD+E+F+V + + S T+ T P+ N
Sbjct: 6 EASEAAKNR--EIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQN 63
Query: 306 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTD-DISSWDADFLKVDQG 452
V ++ILKKVI W T H+ D P+P +D EK+TD I WD FL +DQG
Sbjct: 64 VTASILKKVINWCTKHQSD-PIPTED--SEKKTDGSIQDWDKKFLDIDQG 110
>AF440506-1|AAL34094.1| 174|Caenorhabditis elegans SKR-2 protein.
Length = 174
Score = 117 bits (282), Expect = 1e-26
Identities = 51/71 (71%), Positives = 63/71 (88%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F + +GTLFELILAANYLDIKGLLDV C++VANMIKGK+P+EIR+ FNIK+DFTA E +
Sbjct: 104 FLDIDQGTLFELILAANYLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEERE 163
Query: 613 QVRKENEWCEE 645
Q+RKEN WC++
Sbjct: 164 QIRKENAWCDD 174
Score = 69.7 bits (163), Expect = 3e-12
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Frame = +3
Query: 135 EHSNT*KNKMPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPN 305
E S KN+ IK+ SSD+E+F+V + + S T+ T P+ N
Sbjct: 6 EASEAAKNR--EIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQN 63
Query: 306 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTD-DISSWDADFLKVDQG 452
V ++ILKKVI W T H+ D P+P +D EK+TD I WD FL +DQG
Sbjct: 64 VTASILKKVINWCTKHQSD-PIPTED--SEKKTDGSIQDWDKKFLDIDQG 110
>Z83109-7|CAB05516.1| 167|Caenorhabditis elegans Hypothetical
protein F44G3.6 protein.
Length = 167
Score = 105 bits (252), Expect = 4e-23
Identities = 46/71 (64%), Positives = 59/71 (83%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ +GTLFE+ILAANYLDI+GLLDVT + VANM+KGKTP +IR FNI+NDF+ E +
Sbjct: 97 FMKVDQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGKTPSQIRTLFNIENDFSEEERE 156
Query: 613 QVRKENEWCEE 645
++KEN WCE+
Sbjct: 157 AMKKENAWCED 167
Score = 68.5 bits (160), Expect = 6e-12
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +3
Query: 171 IKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKKVIQW 341
IKL SSD++ F V ++ S TI PL V S IL+K+I W
Sbjct: 10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITW 69
Query: 342 ATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGHTL*INISCKLFGHQGFI 506
+H DD P + DEN K+T DIS WDA+F+KVDQG I ++ +G +
Sbjct: 70 CEHHADDEP-KKVDEN--KKTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLL 121
>AF440507-1|AAL34095.1| 167|Caenorhabditis elegans SKR-3 protein.
Length = 167
Score = 105 bits (252), Expect = 4e-23
Identities = 46/71 (64%), Positives = 59/71 (83%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ +GTLFE+ILAANYLDI+GLLDVT + VANM+KGKTP +IR FNI+NDF+ E +
Sbjct: 97 FMKVDQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGKTPSQIRTLFNIENDFSEEERE 156
Query: 613 QVRKENEWCEE 645
++KEN WCE+
Sbjct: 157 AMKKENAWCED 167
Score = 68.5 bits (160), Expect = 6e-12
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +3
Query: 171 IKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX---PLPNVNSAILKKVIQW 341
IKL SSD++ F V ++ S TI PL V S IL+K+I W
Sbjct: 10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITW 69
Query: 342 ATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGHTL*INISCKLFGHQGFI 506
+H DD P + DEN K+T DIS WDA+F+KVDQG I ++ +G +
Sbjct: 70 CEHHADDEP-KKVDEN--KKTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLL 121
>AL117207-10|CAB60402.1| 159|Caenorhabditis elegans Hypothetical
protein Y60A3A.18 protein.
Length = 159
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ +GTLFE+ILAANYLDI+GLL+VT + VANM+KGKTP ++R F I N F+ E +
Sbjct: 90 FMKVDQGTLFEIILAANYLDIRGLLEVTTQNVANMMKGKTPSQVRTLFKIDN-FSEEELE 148
Query: 613 QVRKENEWCEE 645
++K N WCE+
Sbjct: 149 AMKKGNAWCED 159
Score = 70.5 bits (165), Expect = 1e-12
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Frame = +3
Query: 171 IKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 350
IKL SSD++ F V ++ S TI PLP V SAIL+K+I W +
Sbjct: 10 IKLISSDDKTFTVSRKVISQSKTIS--------GFTSEDTIPLPKVTSAILEKIITWCEH 61
Query: 351 HKDDPPLP-EDDENKEKRTDDISSWDADFLKVDQGHTL*INISCKLFGHQGFI 506
H DD P E E K+T +IS WDA+F+KVDQG I ++ +G +
Sbjct: 62 HADDEPKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEIILAANYLDIRGLL 114
>Z92786-7|CAB07209.1| 145|Caenorhabditis elegans Hypothetical
protein F47H4.10 protein.
Length = 145
Score = 83.0 bits (196), Expect = 3e-16
Identities = 37/53 (69%), Positives = 45/53 (84%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKND 591
F K+ KGTLFEL+LAA YLDIKGL +VTCK++AN IKGK+PEEIR FN+ N+
Sbjct: 89 FLKVDKGTLFELVLAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGNE 141
Score = 74.5 bits (175), Expect = 9e-14
Identities = 40/95 (42%), Positives = 54/95 (56%)
Frame = +3
Query: 168 NIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWAT 347
++K+ +SD+ F+V +IA S + PL NV S I KKVI+W
Sbjct: 7 DVKIVTSDDVEFIVSPKIANQSKLLADFVVLNQREPI-----PLKNVTSEIFKKVIEWCE 61
Query: 348 YHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQG 452
YH +D P P D+ +EKRTDDI WD +FLKVD+G
Sbjct: 62 YHAEDIPKPPDNV-EEKRTDDIGEWDVEFLKVDKG 95
>AF440508-1|AAL34096.1| 144|Caenorhabditis elegans SKR-5 protein.
Length = 144
Score = 83.0 bits (196), Expect = 3e-16
Identities = 37/53 (69%), Positives = 45/53 (84%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKND 591
F K+ KGTLFEL+LAA YLDIKGL +VTCK++AN IKGK+PEEIR FN+ N+
Sbjct: 88 FLKVDKGTLFELVLAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGNE 140
Score = 74.5 bits (175), Expect = 9e-14
Identities = 40/95 (42%), Positives = 54/95 (56%)
Frame = +3
Query: 168 NIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWAT 347
++K+ +SD+ F+V +IA S + PL NV S I KKVI+W
Sbjct: 6 DVKIVTSDDVEFIVSPKIANQSKLLADFVVLNQREPI-----PLKNVTSEIFKKVIEWCE 60
Query: 348 YHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQG 452
YH +D P P D+ +EKRTDDI WD +FLKVD+G
Sbjct: 61 YHAEDIPKPPDNV-EEKRTDDIGEWDVEFLKVDKG 94
>CU457737-5|CAM36326.1| 172|Caenorhabditis elegans Hypothetical
protein C52D10.8 protein.
Length = 172
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LILA+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+
Sbjct: 103 FLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAEE 162
Query: 613 QVRK 624
+K
Sbjct: 163 TAQK 166
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 294 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
P+ NVN + KV + HK D +PED+ N K T I WD FLK++
Sbjct: 59 PVTNVNGKTMAKVAELCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIE 107
>AL023837-2|CAB63347.1| 199|Caenorhabditis elegans Hypothetical
protein Y37H2C.2 protein.
Length = 199
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 609
F KL + TLF+L+LAANYL+I+ L DVT + +ANM+K TP +IR F + N ++AE+
Sbjct: 135 FLKLDQNTLFDLVLAANYLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAED 193
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 294 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQ 449
PL V++ I +K+I++ + PL +I WD++FLK+DQ
Sbjct: 98 PLTKVDAKIFEKIIEYCEHQGTPRPL---------LNGEIGEWDSEFLKLDQ 140
>AF440514-1|AAL34102.1| 172|Caenorhabditis elegans SKR-13 protein.
Length = 172
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LILA+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+
Sbjct: 103 FLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAEE 162
Query: 613 QVRK 624
+K
Sbjct: 163 TAQK 166
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 294 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
P+ NVN + KV + HK D +PED+ N K T I WD FLK++
Sbjct: 59 PVTNVNGKTMAKVAELCEKHKADA-IPEDNMNVLK-TLTIPEWDQKFLKIE 107
>U60980-1|AAB17536.1| 172|Caenorhabditis elegans protein (
Caenorhabditis elegansSkp1p homolog mRNA, complete cds.
).
Length = 172
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LILA+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+
Sbjct: 103 FLKIEDEALFDLILASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTDEQDAAEE 162
Query: 613 QVRK 624
++
Sbjct: 163 TAQR 166
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 294 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
P+ NVN + KV +W HK D +PED+ N K T I WD FLK++
Sbjct: 59 PVTNVNGKTMAKVAEWCEKHKAD-AIPEDNMNVLK-TLTIPEWDQKFLKIE 107
>CU457737-3|CAM36324.1| 172|Caenorhabditis elegans Hypothetical
protein C52D10.6 protein.
Length = 172
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LILA+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+
Sbjct: 103 FLKIEDEALFDLILASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTDEQDAAEE 162
Query: 613 QVRK 624
++
Sbjct: 163 TAQR 166
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 294 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
P+ NVN + KV +W HK D +PED+ N K T I WD FLK++
Sbjct: 59 PVTNVNGKTMAKVAEWCEKHKAD-AIPEDNMNVLK-TLTIPEWDQKFLKIE 107
>AF440513-1|AAL34101.1| 172|Caenorhabditis elegans SKR-12 protein.
Length = 172
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LILA+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E+
Sbjct: 103 FLKIEDEALFDLILASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTDEQDAAEE 162
Query: 613 QVRK 624
++
Sbjct: 163 TAQR 166
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 294 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
P+ NVN + KV +W HK D +PED+ N K T I WD FLK++
Sbjct: 59 PVTNVNGKTMAKVAEWCEKHKAD-AIPEDNMNVLK-TLTIPEWDQKFLKIE 107
>AF440515-1|AAL34103.1| 174|Caenorhabditis elegans SKR-14 protein.
Length = 174
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 609
F K+ LF+LILA+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E
Sbjct: 109 FLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAE 167
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 294 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
P+ NVN ++KV +W H D +PED+ N K T I WD FLK++
Sbjct: 65 PVTNVNGKTMEKVAEWCEKHNAD-AIPEDNMNVLK-TLTIPEWDQKFLKIE 113
>AC024790-6|AAF60635.1| 197|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 14 protein.
Length = 197
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEE 609
F K+ LF+LILA+N+LDIKGL+ CKTV+NM KGKT E+R+ F I D A E
Sbjct: 132 FLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTDEQDAAE 190
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 294 PLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
P+ NVN ++KV +W H D +PED+ N K T I WD FLK++
Sbjct: 88 PVTNVNGKTMEKVAEWCEKHNAD-AIPEDNMNVLK-TLTIPEWDQKFLKIE 136
>CU457737-6|CAM36327.1| 194|Caenorhabditis elegans Hypothetical
protein C52D10.9 protein.
Length = 194
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LI+A NYLD+ GL++ CK VANM GK+P+E+R F I D +
Sbjct: 109 FLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVANMAIGKSPDELRIIFAIPTDEEDEAAE 168
Query: 613 QVRKENEWCEEK 648
+ KE E+K
Sbjct: 169 RAAKEKAEAEKK 180
Score = 51.2 bits (117), Expect = 9e-07
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 174 KLQSSDNEVFVVDVEIAKCS-VTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 350
K++S+D +VF + E K S + P+ NV ILK VI+W
Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 83
Query: 351 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGHTL*INISCKLFGHQGFI 506
HK + LP +D++ K ++ WD +FLK+D + ++C G +
Sbjct: 84 HKGE-ALPVEDDSVPKNI-NVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLM 133
>AF440510-1|AAL34098.1| 194|Caenorhabditis elegans SKR-8 protein.
Length = 194
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LI+A NYLD+ GL++ CK VANM GK+P+E+R F I D +
Sbjct: 109 FLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVANMAIGKSPDELRIIFAIPTDEEDEAAE 168
Query: 613 QVRKENEWCEEK 648
+ KE E+K
Sbjct: 169 RAAKEKAEAEKK 180
Score = 51.2 bits (117), Expect = 9e-07
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 174 KLQSSDNEVFVVDVEIAKCS-VTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 350
K++S+D +VF + E K S + P+ NV ILK VI+W
Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 83
Query: 351 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGHTL*INISCKLFGHQGFI 506
HK + LP +D++ K ++ WD +FLK+D + ++C G +
Sbjct: 84 HKGE-ALPVEDDSVPKNI-NVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLM 133
>AF440509-1|AAL34097.1| 194|Caenorhabditis elegans SKR-7 protein.
Length = 194
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LI+A+N+LD+ GL+ CK VANM GK+P+E+R F I D +
Sbjct: 109 FLKIDNDVLFDLIVASNFLDVPGLMSYACKMVANMAIGKSPDEMRVLFAIPTDEEDEAAE 168
Query: 613 QVRKENEWCEEK 648
+ KE E+K
Sbjct: 169 KAAKEKAEAEKK 180
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 174 KLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATY 350
K++SSD +V+ + E K S T+ P+ NV I+K VI+W
Sbjct: 24 KVESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEK 83
Query: 351 HKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
HK + LP +D++ K + WD +FLK+D
Sbjct: 84 HKGE-TLPVEDDSVPKNI-TVPEWDTNFLKID 113
>AC024790-7|AAF60641.1| 194|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 7 protein.
Length = 194
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LI+A+N+LD+ GL+ CK VANM GK+P+E+R F I D +
Sbjct: 109 FLKIDNDVLFDLIVASNFLDVPGLMSYACKMVANMAIGKSPDEMRVLFAIPTDEEDEAAE 168
Query: 613 QVRKENEWCEEK 648
+ KE E+K
Sbjct: 169 KAAKEKAEAEKK 180
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 174 KLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATY 350
K++SSD +V+ + E K S T+ P+ NV I+K VI+W
Sbjct: 24 KVESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEK 83
Query: 351 HKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
HK + LP +D++ K + WD +FLK+D
Sbjct: 84 HKGE-TLPVEDDSVPKNI-TVPEWDTNFLKID 113
>CU457737-4|CAM36325.1| 194|Caenorhabditis elegans Hypothetical
protein C52D10.7 protein.
Length = 194
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LI+A NYLD+ GL++ CK VA M GK+P+E+R F I D +
Sbjct: 109 FLKIDNDVLFDLIVACNYLDVPGLMNYGCKIVAMMAIGKSPDELRIIFAIPTDEEDEAAE 168
Query: 613 QVRKENEWCEEK 648
+ KE E+K
Sbjct: 169 RAAKEKAEAEKK 180
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 174 KLQSSDNEVFVVDVEIAKCS-VTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 350
K++S+D +VF + E K S + P+ NV ILK VI+W
Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVIEWCEK 83
Query: 351 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGHTL*INISCKLFGHQGFI 506
HK + LP +D++ K ++ WD +FLK+D + ++C G +
Sbjct: 84 HKGE-ALPVEDDSVPKHV-NVPEWDTNFLKIDNDVLFDLIVACNYLDVPGLM 133
>AF440511-1|AAL34099.1| 194|Caenorhabditis elegans SKR-9 protein.
Length = 194
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LI+A NYLD+ GL++ CK VA M GK+P+E+R F I D +
Sbjct: 109 FLKIDNDVLFDLIVACNYLDVPGLMNYGCKIVAMMAIGKSPDELRIIFAIPTDEEDEAAE 168
Query: 613 QVRKENEWCEEK 648
+ KE E+K
Sbjct: 169 RAAKEKAEAEKK 180
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 174 KLQSSDNEVFVVDVEIAKCS-VTIKTXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 350
K++S+D +VF + E K S + P+ NV ILK VI+W
Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVIEWCEK 83
Query: 351 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGHTL*INISCKLFGHQGFI 506
HK + LP +D++ K ++ WD +FLK+D + ++C G +
Sbjct: 84 HKGE-ALPVEDDSVPKHV-NVPEWDTNFLKIDNDVLFDLIVACNYLDVPGLM 133
>AL110479-12|CAB54358.1| 192|Caenorhabditis elegans Hypothetical
protein Y105C5B.13 protein.
Length = 192
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LI+A NYLD+ GL++ CK VA M GK+P+E+R F I D +
Sbjct: 107 FLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVAMMAIGKSPDELRIIFAIPTDEEDEAAE 166
Query: 613 QVRKENEWCEEK 648
+ KE E+K
Sbjct: 167 RAAKEKAEAEKK 178
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +3
Query: 174 KLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATY 350
K++S+D VF + E K S T+ P+ NV ILK VI+W
Sbjct: 22 KVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 81
Query: 351 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGHTL*INISCKLFGHQGFI 506
HK + LP DD++ K + WD +FLK+D + ++C G +
Sbjct: 82 HKGE-ALPVDDDSVPKHI-TVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLM 131
>AF440512-1|AAL34100.1| 192|Caenorhabditis elegans SKR-10 protein.
Length = 192
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F K+ LF+LI+A NYLD+ GL++ CK VA M GK+P+E+R F I D +
Sbjct: 107 FLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVAMMAIGKSPDELRIIFAIPTDEEDEAAE 166
Query: 613 QVRKENEWCEEK 648
+ KE E+K
Sbjct: 167 RAAKEKAEAEKK 178
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +3
Query: 174 KLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLPNVNSAILKKVIQWATY 350
K++S+D VF + E K S T+ P+ NV ILK VI+W
Sbjct: 22 KVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 81
Query: 351 HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGHTL*INISCKLFGHQGFI 506
HK + LP DD++ K + WD +FLK+D + ++C G +
Sbjct: 82 HKGE-ALPVDDDSVPKHI-TVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLM 131
>Z93377-5|CAB07579.1| 195|Caenorhabditis elegans Hypothetical
protein F13A7.9 protein.
Length = 195
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI---KNDFTAA 603
F K++ LF+LI+A N LD+ GL++ CK VA+M GK+PE++R + I K D AA
Sbjct: 112 FLKISSDVLFDLIVACNELDVPGLMNYGCKMVADMAAGKSPEDMRTIYGIPTDKQDADAA 171
Query: 604 EE 609
E+
Sbjct: 172 EK 173
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 174 KLQSSDNEVFVVDVEIAKCSVTIK-TXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWATY 350
KL S D + F + + AK S+ + P+ V IL VI+W
Sbjct: 24 KLVSEDKQEFTISAKAAKKSIVLNDVISRRAPEDSAPMAPIPVEKVTGDILNMVIKWCEQ 83
Query: 351 HKDDPPLPEDDENKEKRTD--DISSWDADFLKVDQGHTL*INISC 479
K+D LP DD + K+ D D+ WDADFLK+ + ++C
Sbjct: 84 RKEDE-LPVDDGSIPKKIDKIDVPQWDADFLKISSDVLFDLIVAC 127
>U39849-9|AAA81051.1| 180|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 17 protein.
Length = 180
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +1
Query: 439 KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 582
+L LF+LI AA +LD+ GL++ CKTVAN KGK EE+R+ F I
Sbjct: 117 RLPMSNLFDLITAAYHLDVTGLINYGCKTVANSAKGKNAEEMRELFGI 164
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = +3
Query: 171 IKLQSSDNEVFVVDVEIAKCSVTIK-TXXXXXXXXXXXXXXXPLP--NVNSAILKKVIQW 341
++L SSD + D+ S T+ T P+P NV LK +I+W
Sbjct: 25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEW 84
Query: 342 ATYHKDDPPLPEDDENKEKRTDDISSWDADFL 437
HK+D P E K+K+ I SWD FL
Sbjct: 85 CDKHKEDDPAIALAE-KDKKNICIPSWDRHFL 115
>AF440517-1|AAL34105.1| 180|Caenorhabditis elegans SKR-17 protein.
Length = 180
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +1
Query: 439 KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 582
+L LF+LI AA +LD+ GL++ CKTVAN KGK EE+R+ F I
Sbjct: 117 RLPMSNLFDLITAAYHLDVTGLINYGCKTVANSAKGKNAEEMRELFGI 164
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = +3
Query: 171 IKLQSSDNEVFVVDVEIAKCSVTIK-TXXXXXXXXXXXXXXXPLP--NVNSAILKKVIQW 341
++L SSD + D+ S T+ T P+P NV LK +I+W
Sbjct: 25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEW 84
Query: 342 ATYHKDDPPLPEDDENKEKRTDDISSWDADFL 437
HK+D P E K+K+ I SWD FL
Sbjct: 85 CDKHKEDDPAIALAE-KDKKNICIPSWDRHFL 115
>U41991-2|AAA83342.2| 181|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 16 protein.
Length = 181
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +1
Query: 457 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAE 606
L +LI A+N L ++ L+D CKTVANM KGK P ++R+ F I D AE
Sbjct: 121 LVDLINASNDLQMQQLMDYACKTVANMAKGKNPAQLRELFGILTDEEEAE 170
>Z50755-5|CAA90636.1| 173|Caenorhabditis elegans Hypothetical
protein R12H7.5 protein.
Length = 173
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 349 IIKTILRYQKMTKTRKRGLMTYHHGM---LIF*KLTKGTLFELILAANYLDIKGLLDVTC 519
+I+ + YQ R+ + YH F + G LF L+ A++ L ++ L+++ C
Sbjct: 65 VIEWLYHYQDNPLARRDSKIRYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGC 124
Query: 520 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 609
A +I+GK+ EEIRK + I++D EE
Sbjct: 125 AAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 165 PNIKLQSSDNEVFVVDVEIAK-CSVTIKTXXXXXXXXXXXXXXXP-LPNVNSAILKKVIQ 338
P KL+S D ++F V+ K C+ + P L +S+I++ VI+
Sbjct: 8 PLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIE 67
Query: 339 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQG 452
W +++D+P D + R D S WD F V+ G
Sbjct: 68 WLYHYQDNPLARRD---SKIRYHDFSEWDKQFFNVESG 102
>AF440519-1|AAL34107.1| 173|Caenorhabditis elegans SKR-20 protein.
Length = 173
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 349 IIKTILRYQKMTKTRKRGLMTYHHGM---LIF*KLTKGTLFELILAANYLDIKGLLDVTC 519
+I+ + YQ R+ + YH F + G LF L+ A++ L ++ L+++ C
Sbjct: 65 VIEWLYHYQDNPLARRDSKIRYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGC 124
Query: 520 KTVANMIKGKTPEEIRKTFNIKNDFTAAEE 609
A +I+GK+ EEIRK + I++D EE
Sbjct: 125 AAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 165 PNIKLQSSDNEVFVVDVEIAK-CSVTIKTXXXXXXXXXXXXXXXP-LPNVNSAILKKVIQ 338
P KL+S D ++F V+ K C+ + P L +S+I++ VI+
Sbjct: 8 PLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIE 67
Query: 339 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQG 452
W +++D+P D + R D S WD F V+ G
Sbjct: 68 WLYHYQDNPLARRD---SKIRYHDFSEWDKQFFNVESG 102
>Z50755-3|CAA90635.1| 182|Caenorhabditis elegans Hypothetical
protein R12H7.3 protein.
Length = 182
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 306 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKV 443
+ + +++KVI+W +HK DPP E E T+DI WDA FL V
Sbjct: 57 IPATVMRKVIEWCDHHKHDPPYDE----SEPETNDIPDWDASFLMV 98
>AF440518-1|AAL34106.1| 155|Caenorhabditis elegans SKR-19 protein.
Length = 155
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 306 VNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKV 443
+ + +++KVI+W +HK DPP E E T+DI WDA FL V
Sbjct: 57 IPATVMRKVIEWCDHHKHDPPYDE----SEPETNDIPDWDASFLMV 98
>AF440516-1|AAL34104.1| 184|Caenorhabditis elegans SKR-15 protein.
Length = 184
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +1
Query: 457 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 627
L +L+ A+N+L++ LL CK +A + KG +PEE+R F I D + ++ KE
Sbjct: 115 LTDLVNASNFLEVMTLLTYCCKFIAGLAKGMSPEEMRVFFCIPTDEEDEKAERFGKE 171
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 177 LQSSDNEVFVVDVEIAKCSVTIK---TXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWAT 347
++S+D V + + K S T+ T P+ VN LK V++W
Sbjct: 23 IESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCE 82
Query: 348 YHKDDPPLPE 377
+HK D P+PE
Sbjct: 83 HHKAD-PVPE 91
>AF099917-7|AAC68782.1| 184|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 15 protein.
Length = 184
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +1
Query: 457 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 627
L +L+ A+N+L++ LL CK +A + KG +PEE+R F I D + ++ KE
Sbjct: 115 LTDLVNASNFLEVMTLLTYCCKFIAGLAKGMSPEEMRVFFCIPTDEEDEKAERFGKE 171
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 177 LQSSDNEVFVVDVEIAKCSVTIK---TXXXXXXXXXXXXXXXPLPNVNSAILKKVIQWAT 347
++S+D V + + K S T+ T P+ VN LK V++W
Sbjct: 23 IESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCE 82
Query: 348 YHKDDPPLPE 377
+HK D P+PE
Sbjct: 83 HHKAD-PVPE 91
>AF045646-12|AAL32222.1| 183|Caenorhabditis elegans Hypothetical
protein F56B3.12 protein.
Length = 183
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 442 LTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 582
L G L +I AA LDI GL++ +TVA+ I GK+ EE+R+ F +
Sbjct: 121 LPMGNLLAVIKAAYDLDITGLVNYGTQTVASRINGKSAEEMREIFQL 167
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 171 IKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXX-PLP-NVNSAILKKVIQWA 344
++L SS+ EV D+ + S TI T P+P + + L +I+W
Sbjct: 29 LQLASSNGEVLQADIRALQLSSTISTTIKELGYDKEDCAEIKPIPVDEHEYTLDLLIKWC 88
Query: 345 TYHK-DDPPLPEDDENKEKRTDDISSWDADFLKV 443
HK DDP + + ++ K+K I SWD F V
Sbjct: 89 DQHKGDDPEIAKAEKGKKKVV--IPSWDQHFFSV 120
>Z70210-1|CAA94149.1| 176|Caenorhabditis elegans Hypothetical
protein K08H2.1 protein.
Length = 176
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F + L L AA L+I GLLDV C+ V+ M+ G+T E++ + + ++E+
Sbjct: 87 FIRTNSAILLHLAEAAFRLEIVGLLDVACRAVSIML-GRTLNEVKLMLRVGGVESPSDEE 145
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 165 PNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLP-NVNSAILKKVIQW 341
P K+QS D +VF V+ + S K PL ++ S +L K+I+W
Sbjct: 8 PVFKIQSCDGQVFAVEDWFIQKS---KCFSVVLAQMNNLVQPHPLKTSICSFVLVKIIEW 64
Query: 342 ATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
+H++ ED ++ ++ +++WD F++ +
Sbjct: 65 CYHHRN-----EDQDHAQR---ILTAWDVQFIRTN 91
>AF440520-1|AAL34108.1| 172|Caenorhabditis elegans SKR-21 protein.
Length = 172
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 433 F*KLTKGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEED 612
F + L L AA L+I GLLDV C+ V+ M+ G+T E++ + + ++E+
Sbjct: 83 FIRTNSAILLHLAEAAFRLEIVGLLDVACRAVSIML-GRTLNEVKLMLRVGGVESPSDEE 141
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 165 PNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXXXPLP-NVNSAILKKVIQW 341
P K+QS D +VF V+ + S K PL ++ S +L K+I+W
Sbjct: 4 PVFKIQSCDGQVFAVEDWFIQKS---KCFSVVLAQMNNLVQPHPLKTSICSFVLVKIIEW 60
Query: 342 ATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVD 446
+H++ ED ++ ++ +++WD F++ +
Sbjct: 61 CYHHRN-----EDQDHAQR---ILTAWDVQFIRTN 87
>U63636-1|AAC47433.1| 500|Caenorhabditis elegans RNA lariat
debranching enzyme protein.
Length = 500
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 369 LPEDDENKEKRTDDISSWDADFLKVDQGHT 458
+ +DD N + DD+ D DF+ +D+GHT
Sbjct: 450 MTQDDANAKPNQDDVDFGDEDFV-IDRGHT 478
>AC006625-2|AAK68279.2| 500|Caenorhabditis elegans Lariat
debranching enzyme relatedprotein 1 protein.
Length = 500
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 369 LPEDDENKEKRTDDISSWDADFLKVDQGHT 458
+ +DD N + DD+ D DF+ +D+GHT
Sbjct: 450 MTQDDANAKPNQDDVDFGDEDFV-IDRGHT 478
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 397 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 427
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 434 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 464
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 434 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 464
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 342 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 372
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 397 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 427
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 434 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 464
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 434 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 464
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 342 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 372
>Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical
protein F25H5.1e protein.
Length = 454
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 264 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 294
>Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical
protein F25H5.1d protein.
Length = 258
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 68 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 98
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 673 KHLYVLSLCMXXLTXFPXGNKNXLXKPSNCW 765
+H ++ S+C L P G+KN SNC+
Sbjct: 434 EHCFLCSMCKISLVDMPFGSKNDRIFCSNCY 464
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 357 DDPPLPEDDENKEKRTDDISSWD 425
DD + +DD+NK ++D WD
Sbjct: 320 DDTMIDQDDDNKSTHSEDSDGWD 342
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 357 DDPPLPEDDENKEKRTDDISSWD 425
DD + +DD+NK ++D WD
Sbjct: 320 DDTMIDQDDDNKSTHSEDSDGWD 342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,325,075
Number of Sequences: 27780
Number of extensions: 299375
Number of successful extensions: 978
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -