Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F12
         (872 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.7  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   6.4  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    22   6.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   6.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   8.5  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 609 FFCSSEIILNVERFTDFFRSLSFDH 535
           FF +S  + N +RF  F R++  DH
Sbjct: 241 FFSTSPELSNKQRFEYFTRTIPSDH 265


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 405 DDISSWDADF 434
           DDIS WD DF
Sbjct: 669 DDISGWDNDF 678


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 447 GQLSKNQHPMMICHQSSFPC 388
           GQ+S    P++ CH +   C
Sbjct: 351 GQISNGYTPVLDCHTAHIAC 370


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 447 GQLSKNQHPMMICHQSSFPC 388
           GQ+S    P++ CH +   C
Sbjct: 62  GQISNGYTPVLDCHTAHIAC 81


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 553 PEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 645
           PE  R    I  D+TA++ D   +   W E+
Sbjct: 172 PEGARVPIEIPRDYTASDLDVEHRVAYWRED 202


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 447 GQLSKNQHPMMICHQSSFPC 388
           GQ+S    P++ CH +   C
Sbjct: 351 GQISNGYTPVLDCHTAHIAC 370


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 114 YLQTKMPLCSGDFSLNPNSESMSQILRIP 28
           Y+QT++P       LNP  + + Q +  P
Sbjct: 332 YMQTRVPAWCDRVLLNPTDKMLVQDISSP 360


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,297
Number of Sequences: 438
Number of extensions: 3851
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)