Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F10
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81107-3|CAE45743.1|  295|Caenorhabditis elegans Hypothetical pr...    93   2e-19
Z81107-2|CAB03226.2|  270|Caenorhabditis elegans Hypothetical pr...    93   2e-19
AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical ...    28   7.4  

>Z81107-3|CAE45743.1|  295|Caenorhabditis elegans Hypothetical
           protein R07H5.3b protein.
          Length = 295

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = +1

Query: 331 IDSFATYGFKLNNGITVLGPMAIFPRTVLSWQVADSDDVTEESLKLFKLLEPRXXXXXXX 510
           +   + YGF+L +G  + GP+A+FP+T LSW+V   +D+T  SL LF  LEP+       
Sbjct: 97  VRGLSCYGFRLLDGTFLYGPIALFPKTALSWRVPTPEDITPRSLALFAALEPK--IDILV 154

Query: 511 XXXXXRSKIDKAFKAA----RANELNIEILATEHACSTFNFLNAEGRSVAAALIPP 666
                +  IDK   +     R +++ +EI+ TE A +TFNFLNAEGR V AAL PP
Sbjct: 155 LGVGDKKNIDKVRASVAPFLREHKIGLEIMDTEDAIATFNFLNAEGRYVGAALYPP 210


>Z81107-2|CAB03226.2|  270|Caenorhabditis elegans Hypothetical
           protein R07H5.3a protein.
          Length = 270

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = +1

Query: 331 IDSFATYGFKLNNGITVLGPMAIFPRTVLSWQVADSDDVTEESLKLFKLLEPRXXXXXXX 510
           +   + YGF+L +G  + GP+A+FP+T LSW+V   +D+T  SL LF  LEP+       
Sbjct: 72  VRGLSCYGFRLLDGTFLYGPIALFPKTALSWRVPTPEDITPRSLALFAALEPK--IDILV 129

Query: 511 XXXXXRSKIDKAFKAA----RANELNIEILATEHACSTFNFLNAEGRSVAAALIPP 666
                +  IDK   +     R +++ +EI+ TE A +TFNFLNAEGR V AAL PP
Sbjct: 130 LGVGDKKNIDKVRASVAPFLREHKIGLEIMDTEDAIATFNFLNAEGRYVGAALYPP 185


>AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical
           protein F19B2.8 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
 Frame = -2

Query: 198 CILKHFQPIIRMTFLLVSSMKIREILIVIRLLNAFFPLS*SYI---KHKI--CKLXNLKE 34
           CIL + Q +  +T+L ++   +  +L + + L  F+P +  Y+   K+KI  C L +L  
Sbjct: 115 CILIYSQVLTILTYLTITFQLLVSLLAISKFLIYFYPSTERYVVLSKYKIWACYLISLFS 174

Query: 33  FPI 25
           + I
Sbjct: 175 YDI 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,095,137
Number of Sequences: 27780
Number of extensions: 301600
Number of successful extensions: 630
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)