Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F09
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0556 + 20415683-20416841,20417563-20417726,20417837-204179...    29   6.5  

>12_02_0556 +
           20415683-20416841,20417563-20417726,20417837-20417926,
           20427889-20429145
          Length = 889

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 147 NAPPSISPIGVXSGXTTFSNNLSVYKHKGQQ 55
           NAPP+I    +  G  TFS N S+++   Q+
Sbjct: 812 NAPPAIPDSAINHGNNTFSTNHSLHRQPQQR 842


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,374,841
Number of Sequences: 37544
Number of extensions: 169422
Number of successful extensions: 182
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)