Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F08
         (910 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    31   2.9  
BT003322-1|AAO25082.1|  575|Drosophila melanogaster AT02511p pro...    29   8.8  
AE013599-2343|AAS64829.1|  575|Drosophila melanogaster CG15920-P...    29   8.8  
AE013599-2342|AAF57953.1|  620|Drosophila melanogaster CG15920-P...    29   8.8  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +2

Query: 653 PPPXXGSXPXRSIPKVXPPAGRXGSRXFPPXNXPFXP 763
           PPP     P  + P   PP  R  +   PP N P  P
Sbjct: 229 PPPPPPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPP 265



 Score = 30.7 bits (66), Expect = 2.9
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +2

Query: 653 PPPXXGSXPXRSIPKVXPPAGRXGSRXFPPXNXPFXP 763
           PPP     P  + P   PP  R  +   PP N P  P
Sbjct: 272 PPPPSPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPP 308



 Score = 29.1 bits (62), Expect = 8.8
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +2

Query: 653 PPPXXGSXPXRSIPKVXPPAGRXGSRXFPPXNXPFXP 763
           PPP     P  + P   PP  R  +   PP N P  P
Sbjct: 315 PPPPPPRTPPPTRPPTKPPTTRPPATYLPPTNKPPPP 351


>BT003322-1|AAO25082.1|  575|Drosophila melanogaster AT02511p
           protein.
          Length = 575

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
 Frame = -3

Query: 818 PXGGKXXGXXXXARXGT*XGXKGGXXXGTXGIPXARXGVXPLEL--SXGXGTXXRGAEPR 645
           P GG   G    +  G   G  GG    T G P    G  P +   + G G    G  P 
Sbjct: 91  PGGGNGNGGRPSSSYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYGAPGGGGNGNGGRPS 150

Query: 644 XIRGQXG 624
              G  G
Sbjct: 151 SSYGAPG 157


>AE013599-2343|AAS64829.1|  575|Drosophila melanogaster CG15920-PB,
           isoform B protein.
          Length = 575

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
 Frame = -3

Query: 818 PXGGKXXGXXXXARXGT*XGXKGGXXXGTXGIPXARXGVXPLEL--SXGXGTXXRGAEPR 645
           P GG   G    +  G   G  GG    T G P    G  P +   + G G    G  P 
Sbjct: 91  PGGGNGNGGRPSSSYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYGAPGGGGNGNGGRPS 150

Query: 644 XIRGQXG 624
              G  G
Sbjct: 151 SSYGAPG 157


>AE013599-2342|AAF57953.1|  620|Drosophila melanogaster CG15920-PA,
           isoform A protein.
          Length = 620

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
 Frame = -3

Query: 818 PXGGKXXGXXXXARXGT*XGXKGGXXXGTXGIPXARXGVXPLEL--SXGXGTXXRGAEPR 645
           P GG   G    +  G   G  GG    T G P    G  P +   + G G    G  P 
Sbjct: 91  PGGGNGNGGRPSSSYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYGAPGGGGNGNGGRPS 150

Query: 644 XIRGQXG 624
              G  G
Sbjct: 151 SSYGAPG 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,719,398
Number of Sequences: 53049
Number of extensions: 352302
Number of successful extensions: 755
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)