Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F06
         (869 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   1.8  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   1.8  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   1.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   2.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   3.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.1  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   7.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.5  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   9.5  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 286 LISAKIRVPVRQYVVLLTNKRL--LQCSCAMKFPFTYNYSSENKKHFITLEKKALKNAFE 459
           L++  + + + +Y+++ TNK +  L+C+ +    F Y +   +  H  +L    +  A  
Sbjct: 156 LLAVFMSLALIEYILMQTNKLVLALECNNSTSEGFDYFFGKMSYSHIFSLMDYNIVMALV 215

Query: 460 HKKEQLKHT 486
            +   L+HT
Sbjct: 216 LQFITLQHT 224


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 286 LISAKIRVPVRQYVVLLTNKRL--LQCSCAMKFPFTYNYSSENKKHFITLEKKALKNAFE 459
           L++  + + + +Y+++ TNK +  L+C+ +    F Y +   +  H  +L    +  A  
Sbjct: 156 LLAVFMSLALIEYILMQTNKLVLALECNNSTSEGFDYFFGKMSYSHIFSLMDYNIVMALV 215

Query: 460 HKKEQLKHT 486
            +   L+HT
Sbjct: 216 LQFITLQHT 224


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 286 LISAKIRVPVRQYVVLLTNKRL--LQCSCAMKFPFTYNYSSENKKHFITLEKKALKNAFE 459
           L++  + + + +Y+++ TNK +  L+C+ +    F Y +   +  H  +L    +  A  
Sbjct: 156 LLAVFMSLALIEYILMQTNKLVLALECNNSTSEGFDYFFGKMSYSHIFSLMDYNIVMALV 215

Query: 460 HKKEQLKHT 486
            +   L+HT
Sbjct: 216 LQFITLQHT 224


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +1

Query: 433 KKALKNAFEHKKEQLKHTEHKLRLKGEEIVRDIRHQGEVTGQK 561
           KK +++  +HK++     E K   +GE   R  +++ E+ G+K
Sbjct: 87  KKIMRHLIDHKRDWWNELEEKYDKEGE--YRK-KYEAEIKGKK 126


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +1

Query: 229 MELTRPWHSIKQISRLKFCLISAKIRVPVRQYVVLLTNKRL 351
           +EL R + S   +SRL+   I+  +R+  +Q  +   N+R+
Sbjct: 130 LELEREFASNMYLSRLRRIEIATCLRLSEKQVKIWFQNRRV 170


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 182 SNNHFKIYSTVNCFSKWS 235
           SNN+FK YS V   S +S
Sbjct: 102 SNNNFKTYSNVTTCSYYS 119


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 53  LLSGCNATRSKAKHQTSKVVR 115
           L SGC     K K    KV+R
Sbjct: 70  LSSGCTKCNQKQKETAEKVIR 90


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 244 PWHSIKQISRLKFCLISAKIRVPV 315
           PW + +Q+ R   C+I     +P+
Sbjct: 460 PWTAPEQVQRAAKCIIGKDYSLPM 483


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 487 EHKLRLKGEEIVRDIRHQGEVTGQKLRVKKEHI 585
           +HK R K  +   DI+HQ  +   + R + + +
Sbjct: 80  KHKSRRKAPQSFEDIQHQRVMANVRERQRTQSL 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,203
Number of Sequences: 336
Number of extensions: 3123
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)