Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F06
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0566 + 10732359-10732497,10733114-10733267,10733448-107335...    30   2.8  
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039...    30   2.8  
01_04_0102 + 16030094-16030462,16030595-16030714,16031715-160317...    29   4.8  
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549...    29   6.4  
08_02_0584 - 19010345-19010656,19010959-19011018                       28   8.5  
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84...    28   8.5  

>09_02_0566 +
           10732359-10732497,10733114-10733267,10733448-10733519,
           10733701-10733769,10734430-10734501,10734590-10734661,
           10734769-10734840,10734928-10734999,10735121-10735192,
           10735293-10735364,10735435-10735506,10735826-10735897,
           10736039-10736104,10736638-10736676,10736787-10736845,
           10737166-10737545,10737629-10737824,10738012-10738179,
           10738618-10738736,10738873-10739083,10739163-10739403,
           10739830-10739980,10740469-10740828
          Length = 999

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 380 GNFIAQLH*SNLLFVNNTTYCLTGTR 303
           G++  +LH + ++F N++TYC  G R
Sbjct: 486 GSYTVKLHFAEIVFTNDSTYCSLGKR 511


>02_05_0484 -
           29401195-29401404,29401572-29401755,29401866-29403973,
           29404320-29404403,29404507-29404777,29404864-29405117,
           29405513-29405722,29406357-29406503
          Length = 1155

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 22/75 (29%), Positives = 38/75 (50%)
 Frame = +1

Query: 373 KFPFTYNYSSENKKHFITLEKKALKNAFEHKKEQLKHTEHKLRLKGEEIVRDIRHQGEVT 552
           KF   +    E + H   LE++A K   E K  +  H   + RLK  E   DI+++ +  
Sbjct: 507 KFEEEWEQLDEKRTH---LEEEAKKLNNEKKNLERWHDNEEKRLKDREDELDIKYKEQ-- 561

Query: 553 GQKLRVKKEHIIKDI 597
           G+ L +K++ +I +I
Sbjct: 562 GENLALKEKSLIDNI 576


>01_04_0102 +
           16030094-16030462,16030595-16030714,16031715-16031792,
           16032760-16032933,16033844-16033921,16034338-16034510,
           16034757-16034912,16036460-16036621,16036815-16036826,
           16036947-16036962,16037663-16037875
          Length = 516

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -1

Query: 659 RHFLSXQXXSNLSLTLALVSKISLMICSFLTRNFCPVTSPWCL 531
           RH  + +  S        + + S   CS+  R   PV  PWC+
Sbjct: 57  RHISTFKLLSGRESNCLGIGRFSSADCSYALRKHLPVKGPWCV 99


>09_04_0613 +
           18953761-18953932,18954672-18954799,18954885-18954956,
           18955033-18955146,18955547-18955615,18955691-18955747,
           18956262-18956315,18956387-18956449,18956543-18956605,
           18956803-18956967,18957111-18957266,18957315-18957416
          Length = 404

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/61 (26%), Positives = 34/61 (55%)
 Frame = +1

Query: 400 SENKKHFITLEKKALKNAFEHKKEQLKHTEHKLRLKGEEIVRDIRHQGEVTGQKLRVKKE 579
           ++ K   +  + + L+   + +K +++ TEH L++  EE+   +R Q E T Q  ++K+ 
Sbjct: 149 ADKKVQELNAKLEKLQKTSDEQKRRIQKTEHALKVAEEEL---MRVQLETTTQLNQLKEV 205

Query: 580 H 582
           H
Sbjct: 206 H 206


>08_02_0584 - 19010345-19010656,19010959-19011018
          Length = 123

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +1

Query: 427 LEKKALKNAFEHKKEQLKHTEHKLRLKGEEIVRDIRHQ-GEVTGQKLRVKKEHIIKDI-- 597
           ++ +A   A EH KE+ K  EH    K E+  ++ + + GE   +  + KKE   K    
Sbjct: 1   MQMEAADVAKEHHKEEKKDKEHAKEAKPEKEKKEKKEKNGEEAAKPAKEKKEKKEKKEKG 60

Query: 598 LETKAKVKE 624
            E K KV+E
Sbjct: 61  KEKKEKVEE 69


>02_01_0112 -
           839048-839552,839638-839720,839828-839982,840078-840557,
           840855-841097,841189-841403,841489-841756,842477-842525
          Length = 665

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 463 KKEQLKHTEHKLRLKGEEIVRDIRHQGEVTGQKLRVKKEHIIKDILET 606
           K E++  T  K RL  EEI R +R   E   +  +VK+    ++ LET
Sbjct: 526 KSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNQLET 573


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,436,819
Number of Sequences: 37544
Number of extensions: 274846
Number of successful extensions: 565
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)