Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F04
         (920 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    25   1.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   2.2  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 198 RNDRRAYEFQQRQALRDDWNQV 263
           RN++R  E  +R+ +  DW QV
Sbjct: 403 RNEKRLAEQDRRERMEFDWKQV 424


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 8   FQLPINTXMWNSXXDFXPFLXCCINKLIAIA 100
           +QL IN   WNS     P +  C+  +  +A
Sbjct: 502 YQLAINHIRWNSAFAIAPAVISCLGIVATMA 532


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 8   FQLPINTXMWNSXXDFXPFLXCCINKLIAIA 100
           +QL IN   WNS     P +  C+  +  +A
Sbjct: 592 YQLAINHIRWNSAFAIAPAVISCLGIVATMA 622


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 119 YYLPSWLQLQLVCLYNTL 66
           YYLP+W  L L  L+  L
Sbjct: 30  YYLPNWTDLVLAGLFTML 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,170
Number of Sequences: 438
Number of extensions: 2049
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)