Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F03
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       30   2.1  
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56...    29   3.7  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +2

Query: 620 PXKKFFXKGPQXGPXPKXGPXXGFLPRXPPPXEIXKKXPXXFXGXTPP 763
           P   F    PQ  P P   P   F P  PPP       P  F    PP
Sbjct: 293 PPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPP 340


>08_01_0080 +
           566509-566746,566904-567151,567347-567532,567639-567734,
           567836-567907,567990-568106,570531-571676
          Length = 700

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +2

Query: 650 QXGPXPKXGPXXGFLPRXPPPXEIXKKXPXXFXGXTPP 763
           Q GP  +  P  G+ PR PPP  +    P       PP
Sbjct: 346 QWGPRSQPQPGYGYPPRGPPPQNMPYSQPYGGYPQQPP 383


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,359,436
Number of Sequences: 37544
Number of extensions: 141060
Number of successful extensions: 147
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)