Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F01
         (871 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.77 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   7.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   7.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   7.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.5  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.5  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   9.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.5  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 654 VLMLNLCIHMVICYMLTSKGLLYFYSRLKIPHL 556
           ++ L+  I  V C    S G+ ++Y  +  PHL
Sbjct: 477 LMELSRAIDSVACSKTVSDGIRHYYVNVTFPHL 509


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 522 LYPHSHWQQLHLH 484
           +Y H  WQQLHL+
Sbjct: 531 VYNHRPWQQLHLN 543


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 16/69 (23%), Positives = 27/69 (39%)
 Frame = +2

Query: 626 MCIHKFSINTNPTWDLVQVAREQEVQRFSQFKINSKRISMYSVMYAGSGNKITIKRKAMD 805
           MC HK  I  N   ++V V   Q+      F ++    ++  +  +   N   I  K   
Sbjct: 567 MCTHKVDIPLNAIVEIVLVDEVQQPNLSHPFHLHGYAFNVIGIGRSPDQNVKKINLKHAL 626

Query: 806 ELDHPKVNH 832
           +LD   + H
Sbjct: 627 DLDRQGLLH 635


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +3

Query: 450 FMGTEVYKTLLDEDEVAASVNGGTVASSGLIDLIQEGAGFSDDYKS 587
           F   ++ + L+ E ++A    GG+   S ++DL + G  ++ + KS
Sbjct: 374 FPNAQLLQQLIRERQLAV---GGSQEESRVLDLSKPGCSYTGEQKS 416


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +3

Query: 369 WCKDYENYTENLQLRILLQCYKKLCEYF 452
           WC+ Y    +N+ +  +L   + L  YF
Sbjct: 15  WCEQYTTKYDNINVDEILASERLLKNYF 42


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 486 EDEVAASVNGGTVASSGLIDLIQEGAGFSDDYKSTGGLSKSAYS 617
           EDE  +S N  T   S LIDL +        Y S   +S++ +S
Sbjct: 28  EDEKRSSENL-TEEKSSLIDLTESEEKSGGSYSSNKNVSRADHS 70


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 615 YMLTSKGLLYFYSRLKIPHLPELNL-LSLSWPL 520
           Y++ +K LL  +S+ K+P LP+  L L+L + L
Sbjct: 29  YLVLNKYLLVKHSKPKMPLLPKTPLPLTLLYKL 61


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 538 KPELATVPPFTLAATSSSS 482
           KP +  +PP     TSSSS
Sbjct: 208 KPTVPKIPPAEFPTTSSSS 226


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 785 IKRKAMDELDHPKVNHHLG 841
           +K++ +D  D+P  N H+G
Sbjct: 61  LKKQRLDNGDYPYENGHMG 79


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 538 KPELATVPPFTLAATSSSS 482
           KP +  +PP     TSSSS
Sbjct: 208 KPTVPKIPPAEFPTTSSSS 226


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 705 DSPNSRSTANGSP 743
           DSPNS+ +A  SP
Sbjct: 219 DSPNSKKSATPSP 231


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 517 PPFTLAATSSSSNNVLYTSV 458
           PP   AA+ ++   VLY+SV
Sbjct: 128 PPDARAASDAARRGVLYSSV 147


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 553 RKVRDFQTTIKVQEAFRS 606
           ++VR FQT +KVQE  +S
Sbjct: 67  KRVR-FQTRVKVQEGSKS 83


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 517 PPFTLAATSSSSNNVLYTSV 458
           PP   AA+ ++   VLY+SV
Sbjct: 284 PPDARAASDAARRGVLYSSV 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,060
Number of Sequences: 336
Number of extensions: 4425
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)