Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F01
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342...    32   0.52 
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299...    29   3.7  
04_04_1095 - 30839573-30839769,30839817-30839964,30840421-308409...    29   3.7  
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365...    29   4.8  
12_01_0456 + 3587244-3587440,3587595-3587766,3587877-3587999,358...    28   8.5  

>05_03_0634 + 16432679-16433076,16433358-16433610,16433993-16434291,
            16434553-16434729,16435001-16435621,16435690-16435784,
            16436000-16436088,16436185-16436250,16436475-16437026,
            16437879-16437953,16438305-16438375,16438456-16438513,
            16441506-16442048
          Length = 1098

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +3

Query: 381  YENYTENLQLRILLQCYKKLCEYFMGTEVYKTLLDEDEVAASVNGGTVASSGL 539
            +  ++     R+LL  Y+K  E      V +  L  DEV  S+ GGT+ +SGL
Sbjct: 898  HREFSRRAMERLLLIAYEKYMEDPWTNNVKQRELLLDEVVGSITGGTLKTSGL 950


>05_01_0383 +
           2990812-2990855,2991364-2991463,2991554-2991622,
           2991724-2991960,2992045-2992228,2992307-2992442,
           2992529-2992691,2992958-2993108,2993154-2993278,
           2993349-2993504,2993792-2993860,2993951-2994019,
           2994127-2994264,2994626-2994773,2994856-2994866,
           2995212-2995352,2995441-2995569,2995860-2995899,
           2996020-2996348,2996902-2996919
          Length = 818

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +2

Query: 680 VAREQEVQRFSQFKINSKRISMYSV-----MYAGSGNKITIKRKAMDELDHPKVNHHLGR 844
           VAR  EV  FS+  ++ K + +        +++G  + +  + KA+D + H K N H GR
Sbjct: 145 VARVTEVP-FSRSSLDHKAVFVVDTESKIFLFSGCNSSMQTRAKALDVVKHLKENRHCGR 203


>04_04_1095 -
           30839573-30839769,30839817-30839964,30840421-30840903,
           30841419-30841910,30842267-30842362
          Length = 471

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 360 SCSWCKDYENYTENLQLRILLQCYKKLCEYFMGTEVYKTLLDEDEVA 500
           S  WC+   N+T  L     LQ Y+KL       E+    LD DE++
Sbjct: 49  SAHWCRPCRNFTPKL-----LQIYRKLRNTCKNMEIIFISLDRDEIS 90


>05_01_0004 -
           34967-35149,35340-35501,36078-36225,36309-36385,
           36507-36577,36850-37263,37518-38268
          Length = 601

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 781 DFIPRASIHYRIHGDPFAVDLELGES 704
           DF+P  ++HY +HG P  +  ++  S
Sbjct: 376 DFVPNNTLHYHLHGHPRIIHRDIKSS 401


>12_01_0456 +
           3587244-3587440,3587595-3587766,3587877-3587999,
           3588165-3588338,3588537-3588647,3588737-3588870,
           3588945-3589038,3589122-3589220,3590494-3590630,
           3590709-3590803,3590922-3591045,3591122-3591209,
           3592867-3593043,3593130-3593167,3593398-3593485,
           3594101-3594209,3594374-3594443,3594520-3594667,
           3595069-3595197,3595292-3595417,3595596-3595658,
           3595952-3596197
          Length = 913

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/22 (40%), Positives = 18/22 (81%)
 Frame = +3

Query: 483 DEDEVAASVNGGTVASSGLIDL 548
           D+DE+  ++NGG +++SG+I +
Sbjct: 856 DDDEIEKALNGGKISASGVISV 877


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,506,007
Number of Sequences: 37544
Number of extensions: 423353
Number of successful extensions: 1076
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)