Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F01
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56964-6|AAB54035.1|  848|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    30   2.5  
AC024881-4|AAK71412.2|  314|Caenorhabditis elegans Serpentine re...    28   7.5  
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z83234-5|CAB70171.2|  640|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    28   10.0 

>U56964-6|AAB54035.1|  848|Caenorhabditis elegans Hypothetical
           protein F52E4.7 protein.
          Length = 848

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/60 (26%), Positives = 35/60 (58%)
 Frame = +2

Query: 683 AREQEVQRFSQFKINSKRISMYSVMYAGSGNKITIKRKAMDELDHPKVNHHLGRVSHSVS 862
           A ++ V RF  F INS+ ++ +     GSG+  ++  ++M++  + +V H +G +  S++
Sbjct: 488 AEQKFVVRF--FHINSELLAQFDTTSTGSGDSSSLGGRSMEKHMNEQVRHVMGNLFDSLN 545


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 577 SSENPAPS*IKSIKPE-LATVPPFTLAATSSSSNNVLYTSVPMKYSHN 437
           +S  P PS      P+   T  P T  ATS++S + + +S P   SH+
Sbjct: 494 TSNQPTPSTSNPTTPKSTVTASPSTTGATSTASPSTITSSAPTSQSHS 541


>AC024881-4|AAK71412.2|  314|Caenorhabditis elegans Serpentine
           receptor, class sx protein5 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 435 FCNTE-GVYVTVSFQYNFHNLYTNCMKVLIFFDHLYTFY 322
           FCN    +Y TVS  + F N+  N + +++F   +  FY
Sbjct: 155 FCNPPLALYPTVSRFWTFSNVVINTITLILFISLILVFY 193


>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
           protein H05L14.2 protein.
          Length = 2162

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 402 LQLRILLQCYKKLCEYFMGTEVYKTLLDEDEVAASVNGGT 521
           L  R L    KK+   F+G  ++KT++D + V   +N  T
Sbjct: 385 LNFRCLEVLIKKMERIFVGKHIFKTMVDRNMVHELINEAT 424


>Z83234-5|CAB70171.2|  640|Caenorhabditis elegans Hypothetical
           protein K09E4.2 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = -2

Query: 558 LPELNLLSLSWPLYPHSHWQQ--LHL-HLIMFCTLL 460
           +P L  + LSW +YP + W    LH+ H+I+F  L+
Sbjct: 378 VPLLAAVELSWNVYPSTWWSSALLHVCHVIIFWHLI 413


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
           protein H05L14.2 protein.
          Length = 2162

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 402 LQLRILLQCYKKLCEYFMGTEVYKTLLDEDEVAASVNGGT 521
           L  R L    KK+   F+G  ++KT++D + V   +N  T
Sbjct: 385 LNFRCLEVLIKKMERIFVGKHIFKTMVDRNMVHELINEAT 424


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,212,038
Number of Sequences: 27780
Number of extensions: 388858
Number of successful extensions: 1166
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)