Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_F01
         (871 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.8  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   3.7  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   3.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   4.8  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   6.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   8.5  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 528 WPLYPHSHWQQLHLHLI 478
           W L PH  WQ    HL+
Sbjct: 101 WSLVPHMAWQLSTAHLL 117


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 801 IAFLLIVILFPEPAYITEYMEIRLLLILNWENL 703
           + FLL  + F E  Y T+Y  + + ++LN E L
Sbjct: 11  VCFLLGEV-FSEDKYTTKYDNVDIDVVLNTERL 42


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 801 IAFLLIVILFPEPAYITEYMEIRLLLILNWENL 703
           + FLL  + F E  Y T+Y  + + ++LN E L
Sbjct: 11  VCFLLGEV-FSEDKYTTKYDNVDIDVVLNTERL 42


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 489 LHLIMFCTLLFP*NIRTTFCNTEGVYVTVSFQYNFHN 379
           + +I F  + FP   +TTF  + GV   ++  Y   N
Sbjct: 235 MEIIKFVNIFFPGGKKTTFFESCGVADLIATCYGGRN 271


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -2

Query: 666 HVGFVLMLNLCIHMVICYMLTSKGLLYFYSRLKIPH---LPELNLLSLSWPLYPHS 508
           ++  +  LN  I      +   KG+++ +   + PH   +    LL L W + PHS
Sbjct: 95  YIEHLTKLNNAIEEKRFELTNRKGVVFHHDDAR-PHTYLVTRQKLLELGWDVLPHS 149


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -1

Query: 277 FSKLPQTVQDKDWLKYGTKRNKSVHVD 197
           FSK+ + + +K+WL   T     ++++
Sbjct: 426 FSKIAENLLEKNWLPVHTSYKSGLNLE 452


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,252
Number of Sequences: 438
Number of extensions: 4985
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)