Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_E22
(874 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0197 - 15522167-15523524,15525416-15525683 30 2.1
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 30 2.1
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444... 30 2.8
08_02_1210 + 25314569-25314596,25315271-25315455,25315539-253156... 29 3.7
01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819 29 4.9
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304... 29 6.4
05_07_0350 - 29457444-29457871,29458786-29461456 29 6.4
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 29 6.4
02_03_0109 - 15333228-15334793,15335255-15335392,15335496-153357... 29 6.4
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 29 6.4
01_07_0260 - 42364769-42364777,42364884-42365354 29 6.4
08_01_1084 - 11120719-11120950,11121035-11121133,11122446-111228... 28 8.5
07_03_0544 + 19309026-19310105 28 8.5
07_01_1113 - 10292781-10293299 28 8.5
05_07_0195 - 28331445-28331641,28331841-28331934,28332019-283320... 28 8.5
05_05_0137 - 22641577-22642119 28 8.5
>09_04_0197 - 15522167-15523524,15525416-15525683
Length = 541
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 471 GWTRKLKRPRTNGTKVGTKP 530
G++++L RPR+NGT + TKP
Sbjct: 416 GFSQRLTRPRSNGTYLSTKP 435
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 684 KRRLDYQLEKSNVERRLAQKHMXRLDSEQRD 776
+++L QL SNVER+ + + R++ EQ+D
Sbjct: 890 QQKLQQQLSDSNVERKKMENEVKRMEIEQKD 920
>03_02_0801 +
11343227-11343885,11344018-11344087,11344362-11344433,
11344511-11344980,11345626-11346598
Length = 747
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -3
Query: 482 PCPTKRPTLVRISRELHTP*PTVTVRSNIRAPLH 381
PCPT VR+S + P PTV V S + AP H
Sbjct: 146 PCPT-----VRVSSAVGAPCPTVRVSSAVGAPCH 174
>08_02_1210 +
25314569-25314596,25315271-25315455,25315539-25315648,
25315756-25315909,25316213-25316237,25316566-25316756,
25316837-25316899,25317012-25317075,25318078-25318109
Length = 283
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 455 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQ 634
P L + +D+E+ E + G + K DAI EK +EL I K+ VLL+
Sbjct: 37 PNLHSNVDREIRQIEQQAYTGVLRAFKVQSDAITWEKESLITELRKELQISDKEHRVLLK 96
>01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819
Length = 266
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 506 WNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERL 661
W G T A+ E E+T++W A E +Q + ++E +Y+ +L
Sbjct: 28 WRHGAPPTYDAVNSLFEAERTQEWPAGSLEETVQNAIKT--WEMELSYKAKL 77
>06_01_0424 +
3041296-3041860,3042701-3042786,3042858-3043147,
3043225-3043285,3043773-3043868,3044448-3044603,
3044811-3044987
Length = 476
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 479 KEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE-AAYRE 655
+E+E + NEG N+ K ++ EK + + E L A + N L+ E + RE
Sbjct: 337 REIECLHKQLNEGENKASKERSRRMKSEKLVKTLSSQVEQLRSANERNANLERELSECRE 396
Query: 656 R 658
R
Sbjct: 397 R 397
>05_07_0350 - 29457444-29457871,29458786-29461456
Length = 1032
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = -2
Query: 282 GIKPSLTLPGSPLTGRAKVFWSCVATSEAEPRATSAVHAVCLL--ALERKATRDNIIYRI 109
G P T PGS GRA V W A A AV A+ER+ R R
Sbjct: 637 GPAPGTTTPGSGGDGRAPVMWLAAALGLLACSVAFAAAAVATTRSAIERR-RRSGWQMRA 695
Query: 108 FYKLFPKCEN 79
F K+ CE+
Sbjct: 696 FQKVRFGCED 705
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 526 NRESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVTPT 675
N GGR GR DG+ R G G+R RG ++ TP+
Sbjct: 668 NSSGRGGRRGGRGDGSRGRGDRGRGRGFGRGDRGHGGRGTPFKQSAGTPS 717
>02_03_0109 -
15333228-15334793,15335255-15335392,15335496-15335771,
15336357-15336422,15338140-15338487
Length = 797
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 146 SSASKQTACTALVARGSASDVATHDQKTFAR 238
++A K AC ALV+RG A+D + + AR
Sbjct: 630 AAAGKLEACRALVSRGGAADAGSETALSVAR 660
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 529 RESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAAR 639
R+ST GR+ G DG + A A H G+ AAR
Sbjct: 28 RQSTRGRSTGSGDGEESEALAAAVHAGKISREDAAAR 64
>01_07_0260 - 42364769-42364777,42364884-42365354
Length = 159
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 571 AVARAGTGAPHPGQEGERAPAA 636
A+A G GA G+EGE+ PAA
Sbjct: 132 AIAGCGAGAVDAGEEGEKRPAA 153
>08_01_1084 -
11120719-11120950,11121035-11121133,11122446-11122849,
11123559-11124197
Length = 457
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 165 VCLLALERKATRDNIIYRIFYKLFPKCENRTVPSTLQLVK 46
+CL+ LE++ N+IY Y +F C+ PS+L L +
Sbjct: 223 ICLMDLEKE--NFNMIYLTDYPIFSLCQAPNSPSSLYLAE 260
>07_03_0544 + 19309026-19310105
Length = 359
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 535 STGGRNRGREDGAVARAGTGAPHPGQEGERAP 630
+ G G GA A AG GAP P E R P
Sbjct: 21 AAGRSGGGGGGGAAAAAGAGAPDPRAEALRCP 52
>07_01_1113 - 10292781-10293299
Length = 172
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 194 SASDVATHDQKTFARPVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLA 355
S+ D AT + PG +RL + + + H + GP+ G+GL+
Sbjct: 91 SSVDAATKGNPPRSARTTSAPGSLRLPEVAQRVVELLHHRHWWFGPWALGLGLS 144
>05_07_0195 -
28331445-28331641,28331841-28331934,28332019-28332099,
28332186-28332234,28332334-28332419,28332513-28332740,
28332819-28332857,28332958-28333047,28333207-28333269,
28333371-28333449,28333539-28333585,28333668-28333730,
28333814-28333864,28333977-28334060,28334162-28334226,
28334559-28334676,28334775-28334825,28335228-28335314,
28335633-28335712,28336676-28336793
Length = 589
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 343 CGSGNIPVQQGNLCNGARILLRTVTVGH 426
CG + PV++GN CNGA + GH
Sbjct: 542 CGVVSSPVRRGNYCNGATKQQKLYQNGH 569
>05_05_0137 - 22641577-22642119
Length = 180
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +1
Query: 532 ESTGGRNRGRE-----DGAVARAGTGAPHPGQEGERAPAARGRL 648
E TGG++ GRE G + A H G+ RA RGR+
Sbjct: 7 EGTGGKHHGREVAMATRGRIPHAALAISHRGKSCVRARGRRGRI 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,514,974
Number of Sequences: 37544
Number of extensions: 471904
Number of successful extensions: 1828
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1828
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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