Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_E22
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 64 1e-10
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z81147-12|CAB03539.2| 494|Caenorhabditis elegans Hypothetical p... 30 2.5
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 29 3.3
AC024772-5|AAF60539.1| 407|Caenorhabditis elegans Hypothetical ... 29 3.3
AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical ... 29 3.3
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93373-3|CAD54120.1| 449|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z83245-12|CAD54180.1| 449|Caenorhabditis elegans Hypothetical p... 29 5.7
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 29 5.7
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 29 5.7
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 64.1 bits (149), Expect = 1e-10
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Frame = +2
Query: 233 ARPVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGL 412
ARP+ P K RL +P+ WF F TGV+GPY F GL +L +KE++V E + + +
Sbjct: 99 ARPMY--PPKSRLLMMPDSWFTPFQKVTGVSGPYLFFGGLFAFLVNKELWVFEEQGHMTV 156
Query: 413 SLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQG- 589
++ + G K+ L + N + +G Q + L++A+E +KT + +
Sbjct: 157 GWILFYLLVTRTAGYKIDQGLYNGYQERVN-FFKGLIQ--EDLKEAVEFKKTSAKQTESL 213
Query: 590 ---QELLIQAKKENVLLQLEAAYRERL 661
+E A KE++ LQLEA YR+ +
Sbjct: 214 NSIKESYPTALKESMALQLEATYRKNV 240
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 63.3 bits (147), Expect = 2e-10
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Frame = +2
Query: 254 PGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVY 433
P K RL +P+ WF F TG +GPY F GL +L +KE++V E + + + ++
Sbjct: 102 PPKTRLLMMPDSWFTAFQKVTGTSGPYLFFGGLFAFLVNKELWVFEEQGHMTVGWILFYL 161
Query: 434 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWR----AQGQELL 601
+ G K+ A L K+ + + +G Q + L++A++ KT + A +E +
Sbjct: 162 LVSRTAGYKIDAGLYKDYQERVG-FFKGLIQ--EDLKEAVDFRKTSAAQTASFAALKEGM 218
Query: 602 IQAKKENVLLQLEAAYRERL 661
+ K+++ LQLEAAYR+ +
Sbjct: 219 PTSLKDSMQLQLEAAYRKNV 238
>Z81147-12|CAB03539.2| 494|Caenorhabditis elegans Hypothetical
protein T09E11.6 protein.
Length = 494
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 171 HAVCLLALERKATRDNIIYRIFYKLFPKCENRTVPSTLQLV 49
HAVC++ LE + + +F K+ P +N V T +L+
Sbjct: 405 HAVCIIGLEHFQAVASFTHLMFNKVIPSFDNSIVECTAELL 445
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 271 WLYS*RMVPILSLENWCDGSLHFWC 345
W Y V ++SL NWC H WC
Sbjct: 95 WFYLHSKVHLISLANWCSSVAH-WC 118
>AC024772-5|AAF60539.1| 407|Caenorhabditis elegans Hypothetical
protein Y40C5A.4a protein.
Length = 407
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 371 CCTGMLPDPHQKCKDPSHQFSSERI 297
CC G+L D HQ+ K +Q SER+
Sbjct: 357 CCPGVLCDTHQRKKLHDNQLESERL 381
>AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical
protein Y40C5A.4b protein.
Length = 441
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 371 CCTGMLPDPHQKCKDPSHQFSSERI 297
CC G+L D HQ+ K +Q SER+
Sbjct: 373 CCPGVLCDTHQRKKLHDNQLESERL 397
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 470 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQ----WRAQGQELLIQAKKENVLLQL 637
W DK E +W + +T E I+ E E W+ +++L + K+EN LL+L
Sbjct: 447 WSDKRNEENAIKWKQ---ETDNIPEVVIKNEDDETDVLYWKLSDEDVLERCKEENELLKL 503
Query: 638 EAAYRERL 661
+ +L
Sbjct: 504 DLLTEHQL 511
>Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical
protein K08C7.4 protein.
Length = 194
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 523 PNRESTGGRNRGREDG--AVARAGTGAPHPGQEGERAPAARGRLQGEA 660
P R + G R+ +E G +V + A ++ ERAP+ARGR Q A
Sbjct: 87 PRRSTRGKRSYDQETGGRSVRKVVKKAKEVNKKPERAPSARGRGQKPA 134
>Z93373-3|CAD54120.1| 449|Caenorhabditis elegans Hypothetical
protein ZK131.11b protein.
Length = 449
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = -3
Query: 857 VHFXASEARSAMQRSSACFSWSGVIALVTLLTIQSXHVLLGETTLHVRLLELVVQTPLHL 678
+H ++ A +A +R S + S + TLL++ H LGE++ + L + T L
Sbjct: 54 LHHLSTVAATASERGSQLTATSSTLGPSTLLSVDKRHSRLGESSPN---LSRIHHTHTQL 110
Query: 677 SVGV 666
S+G+
Sbjct: 111 SLGL 114
>Z83245-12|CAD54180.1| 449|Caenorhabditis elegans Hypothetical
protein ZK131.11b protein.
Length = 449
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = -3
Query: 857 VHFXASEARSAMQRSSACFSWSGVIALVTLLTIQSXHVLLGETTLHVRLLELVVQTPLHL 678
+H ++ A +A +R S + S + TLL++ H LGE++ + L + T L
Sbjct: 54 LHHLSTVAATASERGSQLTATSSTLGPSTLLSVDKRHSRLGESSPN---LSRIHHTHTQL 110
Query: 677 SVGV 666
S+G+
Sbjct: 111 SLGL 114
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 373 LAAQVCCQTHTKSVRTRHTSFRVKELEPFFRNKAKSNFAWLTPYRASKG 227
LAA+ C T +V+ V E E ++ K+ WL+P SKG
Sbjct: 302 LAARNCLITKELNVKISDFGLSVNESETKMKSLKKAPIRWLSPETFSKG 350
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 373 LAAQVCCQTHTKSVRTRHTSFRVKELEPFFRNKAKSNFAWLTPYRASKG 227
LAA+ C T +V+ V E E ++ K+ WL+P SKG
Sbjct: 302 LAARNCLITKELNVKISDFGLSVNESETKMKSLKKAPIRWLSPETFSKG 350
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 479 KEVEATENEWNEGRNQTVKALEDA-IEGEKT----EQWRAQGQELLIQAKK 616
KE+EA +W + + K L + +E +T E+W+ + QE+ IQ K+
Sbjct: 250 KEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQ 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,870
Number of Sequences: 27780
Number of extensions: 377416
Number of successful extensions: 1302
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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