Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_E21
         (884 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142624-1|AAI42625.1|  955|Homo sapiens von Willebrand factor C...    30   9.7  
AY205235-1|AAO47606.1|  673|Homo sapiens URG11 protein.                30   9.7  
AK056571-1|BAB71219.1|  955|Homo sapiens protein ( Homo sapiens ...    30   9.7  

>BC142624-1|AAI42625.1|  955|Homo sapiens von Willebrand factor C
           and EGF domains protein.
          Length = 955

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +2

Query: 602 PDRTIKIPGVSP-----LESSLVRSPVPDPAALPDTCPPFLLRXSVALSHSSP 745
           P  T ++P  SP     L S+L+ +PVP  + L +  PP LL+  V  + SSP
Sbjct: 319 PSPTPRLPTSSPSAPVWLLSTLLATPVPTASLLGNLRPPSLLQGEVMGTPSSP 371


>AY205235-1|AAO47606.1|  673|Homo sapiens URG11 protein.
          Length = 673

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +2

Query: 602 PDRTIKIPGVSP-----LESSLVRSPVPDPAALPDTCPPFLLRXSVALSHSSP 745
           P  T ++P  SP     L S+L+ +PVP  + L +  PP LL+  V  + SSP
Sbjct: 36  PSPTPRLPTSSPSAPVWLLSTLLATPVPTASLLGNLRPPSLLQGEVMGTPSSP 88


>AK056571-1|BAB71219.1|  955|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32009 fis, clone NT2RP7009498, weakly similar to
           FIBULIN-1, ISOFORM A PRECURSOR. ).
          Length = 955

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +2

Query: 602 PDRTIKIPGVSP-----LESSLVRSPVPDPAALPDTCPPFLLRXSVALSHSSP 745
           P  T ++P  SP     L S+L+ +PVP  + L +  PP LL+  V  + SSP
Sbjct: 319 PSPTPRLPTSSPSAPVWLLSTLLATPVPTASLLGNLRPPSLLQGEVMGTPSSP 371


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,300,265
Number of Sequences: 237096
Number of extensions: 2616831
Number of successful extensions: 8223
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8203
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)