Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_E20
         (836 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    59   4e-09
U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    32   0.58 
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    32   0.58 
Z29117-2|CAA82374.1|  216|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +3

Query: 141 LAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAG 290
           LAVLGG   P   D++ ILS+VG++ADAE  K V++ L GK VE+LIA G
Sbjct: 9   LAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEG 58


>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = +3

Query: 141 LAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREK 299
           LA LGG  +P+A DV K+L + G++ D E    V+  L GK + ++IA G+ K
Sbjct: 9   LATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVK 61


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 162 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 281
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 162 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 281
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z29117-2|CAA82374.1|  216|Caenorhabditis elegans Hypothetical
           protein C48B4.3 protein.
          Length = 216

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +3

Query: 159 KTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKACRQLPVREAG 332
           KT  AA  ++K    + ++ +   + K I+++  K    L+   R+K   Q P+R  G
Sbjct: 73  KTDRAARTLQKYFRKIRVKGEQNHINKRISKIPAKRRVVLLEQIRQKMGEQQPIRRFG 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,623,549
Number of Sequences: 27780
Number of extensions: 112228
Number of successful extensions: 372
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)