Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_E19
         (955 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0507 + 3655570-3655573,3655648-3655832                           42   0.001
01_05_0097 - 18074930-18074989,18076194-18076409                       30   2.4  

>06_01_0507 + 3655570-3655573,3655648-3655832
          Length = 62

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 24/55 (43%), Positives = 31/55 (56%)
 Frame = +2

Query: 371 SXARAG*SQRTNPXXGKTTKKEERRLAVLIXXIQYNRRFVNVVQTFGRRRGXNSN 535
           S ARAG  +   P   K  KK++ R       +QYNRRFV  V  FG++RG NS+
Sbjct: 7   SLARAGKVRGQTPKVAKQDKKKKPR-GRAHKRMQYNRRFVTAVVGFGKKRGPNSS 60


>01_05_0097 - 18074930-18074989,18076194-18076409
          Length = 91

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -3

Query: 200 GAEPNGRPWLMXPDPGRXXXG 138
           G E NGR WL  PDP R   G
Sbjct: 47  GGEENGRIWLSCPDPARPRVG 67


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,540,394
Number of Sequences: 37544
Number of extensions: 109614
Number of successful extensions: 169
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)