Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_E16
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    25   0.91 
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   3.7  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   3.7  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   6.4  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   6.4  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   6.4  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   6.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.5  

>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 371 LKSYKDAEIALGSNLDIIASEFGEQAPYALRLLAKVY 481
           ++  +DA    GSN   + + FG Q  Y   ++ KV+
Sbjct: 262 MRGKRDAAGIYGSNSSTVGTIFGYQGTYVNLVIVKVF 298


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/43 (20%), Positives = 22/43 (51%)
 Frame = -2

Query: 153 WIGSCTIIFLL*INTFQIVFISINYIASHKFKSTKISNLKDSL 25
           W+ SC++   L +  F +V   +  +A+   K     +L++++
Sbjct: 279 WMSSCSVFVFLSLMEFAVVNNYMGPVATKAMKGYSDEDLREAI 321


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 683 SFVNCNIHNNSSMNTNVTPNN 745
           S  N  IHNN++ N N   NN
Sbjct: 317 SLSNKTIHNNNNYNNNNYNNN 337


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 665 SNSENISFVNCNIHNNSSMNTN 730
           S S N  + N N +NN++ N N
Sbjct: 84  SLSNNYKYSNYNNYNNNNYNNN 105


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 665 SNSENISFVNCNIHNNSSMNTN 730
           S S N  + N N +NN++ N N
Sbjct: 84  SLSNNYKYSNYNNYNNNNYNNN 105


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 665 SNSENISFVNCNIHNNSSMNTN 730
           S S N  + N N +NN++ N N
Sbjct: 84  SLSNNYKYSNYNNYNNNNYNNN 105


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 665 SNSENISFVNCNIHNNSSMNTN 730
           S S N  + N N +NN++ N N
Sbjct: 84  SLSNNYKYSNYNNYNNNNYNNN 105


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +2

Query: 623 SEFTFGVTTLVNLVSNSEN--ISFVNCNIHNNSSMNTNVTPNN 745
           +E T G   L     NS N  I+  N N + +++ N N   NN
Sbjct: 207 TEATAGAVVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNN 249


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/54 (18%), Positives = 22/54 (40%)
 Frame = +2

Query: 707 NNSSMNTNVTPNNVATRTPMAMSTSITPETQAPMKRMHSVXSGMAPXXFHHHLE 868
           +++S+   +T     T T  A + +    T   + +  ++         HHHL+
Sbjct: 99  SSTSLPATITTTTTTTTTTTATAAATATTTATGLIKQETLQRHHHLQNHHHHLQ 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,836
Number of Sequences: 438
Number of extensions: 5023
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)