Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_E14
         (774 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       34   0.11 
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    33   0.33 
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   1.3  
07_01_0080 + 587674-588510                                             30   1.8  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    29   5.4  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    28   9.5  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 18/49 (36%), Positives = 18/49 (36%)
 Frame = +1

Query: 589 PPXXXGGXXPXKXXGXPXXFXXXGGXXPPPXXXPXXXXXPPPPPXGXKK 735
           PP       P    G P      G   PPP   P     PPPPP G KK
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKG---PPPPPPPKGPSPPPPPPPGGKK 374



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = +1

Query: 589 PPXXXGGXXPXKXXGXPXXFXXXGGXXPPPXXXPXXXXXPPPPP 720
           PP   G   P    G P      G   PPP         PPPPP
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
 Frame = +1

Query: 574 PXKXXPPXXXGGXXPXKXXGXPXXFXXXGGXXPPPXXXP--XXXXXPPPPPXG 726
           P    PP    G  P      P       G  PPP   P       PPPPP G
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
 Frame = +1

Query: 574 PXKXXPPXXXGGXXPX----KXXGXPXXFXXXGGXXPPPXXXPXXXXXPPPPP 720
           P    PP   GG  P        G P       G  PPP   P     PPPPP
Sbjct: 6   PYAPHPPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPP 58


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +1

Query: 589  PPXXXGGXXPXKXXGXPXXFXXXGGXXPPPXXXPXXXXXPPPPPXGXK 732
            PP   GG    +    P      GG  PPP          PPPP G +
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFR 1170


>07_01_0080 + 587674-588510
          Length = 278

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/43 (32%), Positives = 15/43 (34%)
 Frame = +1

Query: 592 PXXXGGXXPXKXXGXPXXFXXXGGXXPPPXXXPXXXXXPPPPP 720
           P   GG    +    P       G  PPP   P     PPPPP
Sbjct: 79  PPRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 670 PPPXXXPXXXXXPPPPPXGXKK 735
           PPP   P     PPPPP   KK
Sbjct: 361 PPPPPPPPPPPRPPPPPPPIKK 382


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 661 GXXPPPXXXPXXXXXPPPPP 720
           G  PPP   P     PPPPP
Sbjct: 137 GQEPPPPHVPKAAPPPPPPP 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,912,284
Number of Sequences: 37544
Number of extensions: 266620
Number of successful extensions: 1622
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)