BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_E13
(885 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26488-1|BAA05499.1| 686|Homo sapiens KIAA0007 protein. 58 6e-08
CR456762-1|CAG33043.1| 655|Homo sapiens KATNB1 protein. 36 0.20
BT007022-1|AAP35668.1| 655|Homo sapiens katanin p80 (WD40-conta... 36 0.20
BC001353-1|AAH01353.1| 655|Homo sapiens katanin p80 (WD repeat ... 36 0.20
AL121990-7|CAI22015.1| 589|Homo sapiens TAF5-like RNA polymeras... 35 0.45
AJ009770-1|CAA08816.1| 260|Homo sapiens putative transcription ... 35 0.45
AF069736-1|AAC39906.1| 589|Homo sapiens PCAF associated factor ... 35 0.45
AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens ... 34 0.60
EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein. 33 1.0
EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related... 33 1.0
EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related... 33 1.0
BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein. 33 1.0
BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein. 33 1.0
AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein. 33 1.0
AK123876-1|BAC85713.1| 428|Homo sapiens protein ( Homo sapiens ... 33 1.0
AK026330-1|BAB15448.1| 173|Homo sapiens protein ( Homo sapiens ... 33 1.0
AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein. 33 1.0
M24194-1|AAA59626.1| 317|Homo sapiens MHC B complex protein 12.... 33 1.4
CR541909-1|CAG46707.1| 317|Homo sapiens GNB2L1 protein. 33 1.4
CR456978-1|CAG33259.1| 317|Homo sapiens GNB2L1 protein. 33 1.4
BC032006-1|AAH32006.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
BC021993-1|AAH21993.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
BC019362-1|AAH19362.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
BC019093-1|AAH19093.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
BC017287-1|AAH17287.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
BC014788-1|AAH14788.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
BC014256-1|AAH14256.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
BC010119-1|AAH10119.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
BC000366-1|AAH00366.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
BC000214-1|AAH00214.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
AY159316-1|AAO21313.1| 347|Homo sapiens lung cancer oncogene 7 ... 33 1.4
AK222488-1|BAD96208.1| 317|Homo sapiens guanine nucleotide bind... 33 1.4
EF011613-1|ABK41103.1| 513|Homo sapiens CDW3/SMU1 protein. 33 1.8
BC110654-1|AAI10655.1| 513|Homo sapiens smu-1 suppressor of mec... 33 1.8
BC012938-1|AAH12938.1| 446|Homo sapiens TBL2 protein protein. 33 1.8
BC002876-1|AAH02876.1| 513|Homo sapiens smu-1 suppressor of mec... 33 1.8
AY358518-1|AAQ88882.1| 447|Homo sapiens TBL2 protein. 33 1.8
AL162590-6|CAI15554.1| 513|Homo sapiens smu-1 suppressor of mec... 33 1.8
AK074619-1|BAC11093.1| 447|Homo sapiens protein ( Homo sapiens ... 33 1.8
AK001667-1|BAA91822.1| 513|Homo sapiens protein ( Homo sapiens ... 33 1.8
AF097485-1|AAF06824.1| 447|Homo sapiens transducin beta-like 2 ... 33 1.8
AF097484-1|AAF06823.1| 447|Homo sapiens transducin beta-like 2 ... 33 1.8
AF056183-1|AAD28083.1| 426|Homo sapiens WS beta-transducin repe... 33 1.8
Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein. 32 2.4
BC101616-1|AAI01617.1| 1102|Homo sapiens WD repeat domain 72 pro... 32 2.4
BC101614-1|AAI01615.1| 1102|Homo sapiens WD repeat domain 72 pro... 32 2.4
BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2... 32 2.4
BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2... 32 2.4
BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2... 32 2.4
AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2... 32 2.4
AK096055-1|BAC04689.1| 775|Homo sapiens protein ( Homo sapiens ... 32 2.4
AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein. 32 2.4
AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2... 32 2.4
X95263-1|CAA64560.1| 919|Homo sapiens PWP2 protein. 31 4.2
U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated pro... 31 4.2
U56089-1|AAC50905.1| 919|Homo sapiens periodic tryptophan prote... 31 4.2
U56085-1|AAC50904.1| 919|Homo sapiens periodic tryptophan prote... 31 4.2
U53346-1|AAB08084.1| 919|Homo sapiens PWP2H protein protein. 31 4.2
CR457279-1|CAG33560.1| 330|Homo sapiens WDR5B protein. 31 4.2
BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated p... 31 4.2
BC043494-1|AAH43494.1| 330|Homo sapiens WD repeat domain 5B pro... 31 4.2
BC014988-1|AAH14988.1| 919|Homo sapiens PWP2 periodic tryptopha... 31 4.2
BC013309-1|AAH13309.1| 919|Homo sapiens PWP2 periodic tryptopha... 31 4.2
AP001753-1|BAA95553.1| 919|Homo sapiens periodic tryptophan pro... 31 4.2
AK002149-1|BAA92110.1| 330|Homo sapiens protein ( Homo sapiens ... 31 4.2
AB209438-1|BAD92675.1| 316|Homo sapiens PWP2 periodic tryptopha... 31 4.2
AB001517-2|BAA21137.1| 919|Homo sapiens PWP2 protein protein. 31 4.2
BC088354-1|AAH88354.1| 326|Homo sapiens G protein beta subunit-... 31 5.6
BC052292-1|AAH52292.1| 326|Homo sapiens GBL protein protein. 31 5.6
BC017119-1|AAH17119.1| 326|Homo sapiens G protein beta subunit-... 31 5.6
BC001313-1|AAH01313.1| 326|Homo sapiens G protein beta subunit-... 31 5.6
AY223837-1|AAO73410.1| 260|Homo sapiens LST8 protein. 31 5.6
AK097556-1|BAC05100.1| 518|Homo sapiens protein ( Homo sapiens ... 31 5.6
AK074434-1|BAB85082.1| 293|Homo sapiens protein ( Homo sapiens ... 31 5.6
AF195883-1|AAF04308.1| 230|Homo sapiens G protein beta subunit ... 31 5.6
AB209669-1|BAD92906.1| 1903|Homo sapiens Telomerase protein comp... 31 5.6
BC025392-1|AAH25392.1| 620|Homo sapiens WD repeat domain 16 pro... 30 9.7
BC002489-1|AAH02489.1| 606|Homo sapiens WD repeat domain 1 prot... 30 9.7
BC000201-1|AAH00201.1| 606|Homo sapiens WD repeat domain 1 prot... 30 9.7
AK222897-1|BAD96617.1| 606|Homo sapiens WD repeat-containing pr... 30 9.7
AK222764-1|BAD96484.1| 606|Homo sapiens WD repeat-containing pr... 30 9.7
AK094847-1|BAC04435.1| 630|Homo sapiens protein ( Homo sapiens ... 30 9.7
AK074435-1|BAB85083.1| 412|Homo sapiens protein ( Homo sapiens ... 30 9.7
AF020260-1|AAD05045.1| 534|Homo sapiens WDR1 protein protein. 30 9.7
AF020056-1|AAD05044.1| 606|Homo sapiens WDR1 protein protein. 30 9.7
AB209746-1|BAD92983.1| 624|Homo sapiens WD repeat-containing pr... 30 9.7
AB065281-1|BAB83743.1| 620|Homo sapiens WDR16 protein. 30 9.7
AB010427-1|BAA31855.2| 606|Homo sapiens NORI-1 protein. 30 9.7
>D26488-1|BAA05499.1| 686|Homo sapiens KIAA0007 protein.
Length = 686
Score = 57.6 bits (133), Expect = 6e-08
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Frame = +3
Query: 186 HLTSPPTCLQWTTVS-QSVSNLKGXXXXXXXXXXXXXXQCIVLGTTNGKLLIYSISQAKI 362
HL+ TCL W Q+ + + + LGT G +L+YS + ++
Sbjct: 66 HLSGTCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGEL 125
Query: 363 INVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQTYNISIENNTKQG 539
+ + H + +V + W + G LYSC+ D + EWN++ VK +
Sbjct: 126 HSKLISGGHDN-RVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWK-------GDN 177
Query: 540 SNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDV--------TLIKSLGYSTSQTAI 695
S+++++ I P + L++A + LW L K+V T + SL ++T +
Sbjct: 178 SSVSSLCISP-----DGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPN 232
Query: 696 LSL-VSFNDAYYIVEGSENERLLSFWDV 776
S Y + G+ ++RLL+ W V
Sbjct: 233 ESQPFDGITGLYFLSGAVHDRLLNVWQV 260
Score = 37.1 bits (82), Expect = 0.085
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 98 YYSTITKDGRLKIWDTETNVLKQEYTPXSSLNIT 199
Y++ + DG L++W+T N L QEY P + L+ T
Sbjct: 37 YFALASTDGHLRVWETANNRLHQEYVPSAHLSGT 70
>CR456762-1|CAG33043.1| 655|Homo sapiens KATNB1 protein.
Length = 655
Score = 35.9 bits (79), Expect = 0.20
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLY--SCTKDSRVYE 470
+ IV G+ +G + ++ + AKI+ + K A + +LD+ YG + S ++D+ +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHK---ANICSLDF-HPYGEFVASGSQDTNIKL 131
Query: 471 WNIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDV 650
W+I Y + A++ + + K + + LW D+
Sbjct: 132 WDIRRKGCVFRYR----------GHSQAVRCLRFSPDGKWLASAADDHTVKLW-----DL 176
Query: 651 TLIKSLGYSTSQTAILSLVSFNDAYYIVEGSENERLLSFWDV 776
T K + T +++V F+ Y++ ++R + FWD+
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>BT007022-1|AAP35668.1| 655|Homo sapiens katanin p80
(WD40-containing) subunit B 1 protein.
Length = 655
Score = 35.9 bits (79), Expect = 0.20
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLY--SCTKDSRVYE 470
+ IV G+ +G + ++ + AKI+ + K A + +LD+ YG + S ++D+ +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHK---ANICSLDF-HPYGEFVASGSQDTNIKL 131
Query: 471 WNIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDV 650
W+I Y + A++ + + K + + LW D+
Sbjct: 132 WDIRRKGCVFRYR----------GHSQAVRCLRFSPDGKWLASAADDHTVKLW-----DL 176
Query: 651 TLIKSLGYSTSQTAILSLVSFNDAYYIVEGSENERLLSFWDV 776
T K + T +++V F+ Y++ ++R + FWD+
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>BC001353-1|AAH01353.1| 655|Homo sapiens katanin p80 (WD repeat
containing) subunit B 1 protein.
Length = 655
Score = 35.9 bits (79), Expect = 0.20
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLY--SCTKDSRVYE 470
+ IV G+ +G + ++ + AKI+ + K A + +LD+ YG + S ++D+ +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLMGHK---ANICSLDF-HPYGEFVASGSQDTNIKL 131
Query: 471 WNIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDV 650
W+I Y + A++ + + K + + LW D+
Sbjct: 132 WDIRRKGCVFRYR----------GHSQAVRCLRFSPDGKWLASAADDHTVKLW-----DL 176
Query: 651 TLIKSLGYSTSQTAILSLVSFNDAYYIVEGSENERLLSFWDV 776
T K + T +++V F+ Y++ ++R + FWD+
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>AL121990-7|CAI22015.1| 589|Homo sapiens TAF5-like RNA polymerase
II, p300/CBP-associated factor (PCAF)-associated facto
protein.
Length = 589
Score = 34.7 bits (76), Expect = 0.45
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDN 223
FS +GKY ++ +D RLK+WD + L +E + NITS + D+
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTD-NITSLTFSPDS 522
>AJ009770-1|CAA08816.1| 260|Homo sapiens putative transcription
factor protein.
Length = 260
Score = 34.7 bits (76), Expect = 0.45
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDN 223
FS +GKY ++ +D RLK+WD + L +E + NITS + D+
Sbjct: 147 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTD-NITSLTFSPDS 193
>AF069736-1|AAC39906.1| 589|Homo sapiens PCAF associated factor 65
beta protein.
Length = 589
Score = 34.7 bits (76), Expect = 0.45
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDN 223
FS +GKY ++ +D RLK+WD + L +E + NITS + D+
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTD-NITSLTFSPDS 522
>AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14948 fis, clone PLACE2000164, weakly similar to
TIPD PROTEIN. ).
Length = 504
Score = 34.3 bits (75), Expect = 0.60
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 357 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 412
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ + K GS+ + P + + +A L +W + V
Sbjct: 413 DLRTNAIKQTFSAT---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 466
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 467 KVLSKQHSSSINAV 480
>EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein.
Length = 588
Score = 33.5 bits (73), Expect = 1.0
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 441 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 496
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ K GS+ + P + + +A L +W + V
Sbjct: 497 DLRTNAIKQTFSAP---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 550
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 551 KVLSKQHSSSINAV 564
>EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 444
Score = 33.5 bits (73), Expect = 1.0
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 297 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 352
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ K GS+ + P + + +A L +W + V
Sbjct: 353 DLRTNAIKQTFSAP---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 406
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 407 KVLSKQHSSSINAV 420
>EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 588
Score = 33.5 bits (73), Expect = 1.0
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 441 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 496
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ K GS+ + P + + +A L +W + V
Sbjct: 497 DLRTNAIKQTFSAP---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 550
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 551 KVLSKQHSSSINAV 564
>BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein.
Length = 523
Score = 33.5 bits (73), Expect = 1.0
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 376 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 431
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ K GS+ + P + + +A L +W + V
Sbjct: 432 DLRTNAIKQTFSAP---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 485
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 486 KVLSKQHSSSINAV 499
>BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein.
Length = 475
Score = 33.5 bits (73), Expect = 1.0
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 328 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 383
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ K GS+ + P + + +A L +W + V
Sbjct: 384 DLRTNAIKQTFSAP---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 437
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 438 KVLSKQHSSSINAV 451
>AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein.
Length = 607
Score = 33.5 bits (73), Expect = 1.0
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 460 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 515
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ K GS+ + P + + +A L +W + V
Sbjct: 516 DLRTNAIKQTFSAP---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 569
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 570 KVLSKQHSSSINAV 583
>AK123876-1|BAC85713.1| 428|Homo sapiens protein ( Homo sapiens
cDNA FLJ41882 fis, clone OCBBF2022351, weakly similar
to TIPD PROTEIN. ).
Length = 428
Score = 33.5 bits (73), Expect = 1.0
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 281 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 336
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ K GS+ + P + + +A L +W + V
Sbjct: 337 DLRTNAIKQTFSAP---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 390
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 391 KVLSKQHSSSINAV 404
>AK026330-1|BAB15448.1| 173|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22677 fis, clone HSI10648. ).
Length = 173
Score = 33.5 bits (73), Expect = 1.0
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 26 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 81
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ K GS+ + P + + +A L +W + V
Sbjct: 82 DLRTNAIKQTFSAP---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 135
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 136 KVLSKQHSSSINAV 149
>AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein.
Length = 523
Score = 33.5 bits (73), Expect = 1.0
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 376 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 431
Query: 474 NIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVT 653
++ ++KQT++ K GS+ + P + + +A L +W + V
Sbjct: 432 DLRTNAIKQTFSAP---GFKCGSDWTRVVFSPDGSYVAAG---SAEGSLYIWSVLTGKVE 485
Query: 654 LIKSLGYSTSQTAI 695
+ S +S+S A+
Sbjct: 486 KVLSKQHSSSINAV 499
>M24194-1|AAA59626.1| 317|Homo sapiens MHC B complex protein 12.3
protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>CR541909-1|CAG46707.1| 317|Homo sapiens GNB2L1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>CR456978-1|CAG33259.1| 317|Homo sapiens GNB2L1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC032006-1|AAH32006.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC021993-1|AAH21993.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC019362-1|AAH19362.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC019093-1|AAH19093.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC017287-1|AAH17287.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC014788-1|AAH14788.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC014256-1|AAH14256.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC010119-1|AAH10119.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC000366-1|AAH00366.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>BC000214-1|AAH00214.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>AY159316-1|AAO21313.1| 347|Homo sapiens lung cancer oncogene 7
protein.
Length = 347
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 96 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 152
>AK222488-1|BAD96208.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 varia
protein.
Length = 317
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + DG L++WD T + + + ++ S + DNRQ +S
Sbjct: 66 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVS 122
>EF011613-1|ABK41103.1| 513|Homo sapiens CDW3/SMU1 protein.
Length = 513
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 71 EAMFSEDGKYYSTITKDGRLKIWDTET 151
EA F++DG Y + + DG +KIW+ +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>BC110654-1|AAI10655.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 71 EAMFSEDGKYYSTITKDGRLKIWDTET 151
EA F++DG Y + + DG +KIW+ +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>BC012938-1|AAH12938.1| 446|Homo sapiens TBL2 protein protein.
Length = 446
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQE 169
FS D + ++++KDG K+WDT+ K++
Sbjct: 287 FSNDSRRMASVSKDGTWKLWDTDVEYKKKQ 316
>BC002876-1|AAH02876.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 71 EAMFSEDGKYYSTITKDGRLKIWDTET 151
EA F++DG Y + + DG +KIW+ +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>AY358518-1|AAQ88882.1| 447|Homo sapiens TBL2 protein.
Length = 447
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQE 169
FS D + ++++KDG K+WDT+ K++
Sbjct: 287 FSNDSRRMASVSKDGTWKLWDTDVEYKKKQ 316
>AL162590-6|CAI15554.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 71 EAMFSEDGKYYSTITKDGRLKIWDTET 151
EA F++DG Y + + DG +KIW+ +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>AK074619-1|BAC11093.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ90138 fis, clone HEMBB1000905, weakly similar to
TRANSCRIPTIONAL REPRESSOR RCO-1. ).
Length = 447
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQE 169
FS D + ++++KDG K+WDT+ K++
Sbjct: 287 FSNDSRRMASVSKDGTWKLWDTDVEYKKKQ 316
>AK001667-1|BAA91822.1| 513|Homo sapiens protein ( Homo sapiens
cDNA FLJ10805 fis, clone NT2RP4000839, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 513
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 71 EAMFSEDGKYYSTITKDGRLKIWDTET 151
EA F++DG Y + + DG +KIW+ +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>AF097485-1|AAF06824.1| 447|Homo sapiens transducin beta-like 2
protein.
Length = 447
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQE 169
FS D + ++++KDG K+WDT+ K++
Sbjct: 287 FSNDSRRMASVSKDGTWKLWDTDVEYKKKQ 316
>AF097484-1|AAF06823.1| 447|Homo sapiens transducin beta-like 2
protein.
Length = 447
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQE 169
FS D + ++++KDG K+WDT+ K++
Sbjct: 287 FSNDSRRMASVSKDGTWKLWDTDVEYKKKQ 316
>AF056183-1|AAD28083.1| 426|Homo sapiens WS beta-transducin repeats
protein protein.
Length = 426
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQE 169
FS D + ++++KDG K+WDT+ K++
Sbjct: 266 FSNDSRRMASVSKDGTWKLWDTDVEYKKKQ 295
>Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein.
Length = 370
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 IVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNI 479
I L N ++ IY + ++ + +H + +T +DW+ K + +C D Y W+
Sbjct: 23 IALSPNNHEVHIYKKNGSQWVKAHELKEH-NGHITGIDWAPKSDRIVTCGADRNAYVWSQ 81
Query: 480 EDGSVKQT 503
+DG K T
Sbjct: 82 KDGVWKPT 89
>BC101616-1|AAI01617.1| 1102|Homo sapiens WD repeat domain 72
protein.
Length = 1102
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 591 RYLVTASY--QLSLWRLHNKDVTLIKSL--GYSTSQTAILSLVSFNDAYYIVEGSENERL 758
R +VT S QL LW L ++ K L G+S S T + F+ YIV +EN
Sbjct: 30 RTIVTGSQEGQLCLWNLSHELKISAKELLFGHSASVTCLARARDFSKQPYIVSAAENGE- 88
Query: 759 LSFWDVT 779
+ W+VT
Sbjct: 89 MCVWNVT 95
>BC101614-1|AAI01615.1| 1102|Homo sapiens WD repeat domain 72
protein.
Length = 1102
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 591 RYLVTASY--QLSLWRLHNKDVTLIKSL--GYSTSQTAILSLVSFNDAYYIVEGSENERL 758
R +VT S QL LW L ++ K L G+S S T + F+ YIV +EN
Sbjct: 30 RTIVTGSQEGQLCLWNLSHELKISAKELLFGHSASVTCLARARDFSKQPYIVSAAENGE- 88
Query: 759 LSFWDVT 779
+ W+VT
Sbjct: 89 MCVWNVT 95
>BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 IVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNI 479
I L N ++ IY + ++ + +H + +T +DW+ K + +C D Y W+
Sbjct: 23 IALSPNNHEVHIYKKNGSQWVKAHELKEH-NGHITGIDWAPKSDRIVTCGADRNAYVWSQ 81
Query: 480 EDGSVKQT 503
+DG K T
Sbjct: 82 KDGVWKPT 89
>BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 IVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNI 479
I L N ++ IY + ++ + +H + +T +DW+ K + +C D Y W+
Sbjct: 23 IALSPNNHEVHIYKKNGSQWVKAHELKEH-NGHITGIDWAPKSDRIVTCGADRNAYVWSQ 81
Query: 480 EDGSVKQT 503
+DG K T
Sbjct: 82 KDGVWKPT 89
>BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 IVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNI 479
I L N ++ IY + ++ + +H + +T +DW+ K + +C D Y W+
Sbjct: 23 IALSPNNHEVHIYKKNGSQWVKAHELKEH-NGHITGIDWAPKSDRIVTCGADRNAYVWSQ 81
Query: 480 EDGSVKQT 503
+DG K T
Sbjct: 82 KDGVWKPT 89
>AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 365
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 IVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNI 479
I L N ++ IY + ++ + +H + +T +DW+ K + +C D Y W+
Sbjct: 18 IALSPNNHEVHIYKKNGSQWVKAHELKEH-NGHITGIDWAPKSDRIVTCGADRNAYVWSQ 76
Query: 480 EDGSVKQT 503
+DG K T
Sbjct: 77 KDGVWKPT 84
>AK096055-1|BAC04689.1| 775|Homo sapiens protein ( Homo sapiens
cDNA FLJ38736 fis, clone KIDNE2010989, weakly similar to
Rattus norvegicus TGF-beta resistance-associated protein
(TRAG) ).
Length = 775
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 591 RYLVTASY--QLSLWRLHNKDVTLIKSL--GYSTSQTAILSLVSFNDAYYIVEGSENERL 758
R +VT S QL LW L ++ K L G+S S T + F+ YIV +EN
Sbjct: 30 RTIVTGSQEGQLCLWNLSHELKISAKELLFGHSASVTCLARARDFSKQPYIVSAAENGE- 88
Query: 759 LSFWDVT 779
+ W+VT
Sbjct: 89 MCVWNVT 95
>AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein.
Length = 166
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 IVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNI 479
I L N ++ IY + ++ + +H + +T +DW+ K + +C D Y W+
Sbjct: 23 IALSPNNHEVHIYKKNGSQWVKAHELKEH-NGHITGIDWAPKSDRIVTCGADRNAYVWSQ 81
Query: 480 EDGSVKQT 503
+DG K T
Sbjct: 82 KDGVWKPT 89
>AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 401
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 IVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNI 479
I L N ++ IY + ++ + +H + +T +DW+ K + +C D Y W+
Sbjct: 54 IALSPNNHEVHIYKKNGSQWVKAHELKEH-NGHITGIDWAPKSDRIVTCGADRNAYVWSQ 112
Query: 480 EDGSVKQT 503
+DG K T
Sbjct: 113 KDGVWKPT 120
>X95263-1|CAA64560.1| 919|Homo sapiens PWP2 protein.
Length = 919
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSS 187
+M +S DG+Y T DG++K+W+T + +T SS
Sbjct: 375 SMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 416
>U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated protein
TP-1 protein.
Length = 2627
Score = 31.5 bits (68), Expect = 4.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 83 SEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVP 211
S D + +T+ G LK+WDT L ++T SLN ++ P
Sbjct: 1768 SPDCRLLATVCLGGCLKLWDTVRGQLAFQHTYPKSLNCVAFHP 1810
>U56089-1|AAC50905.1| 919|Homo sapiens periodic tryptophan protein
2 protein.
Length = 919
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSS 187
+M +S DG+Y T DG++K+W+T + +T SS
Sbjct: 375 SMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 416
>U56085-1|AAC50904.1| 919|Homo sapiens periodic tryptophan protein
2 protein.
Length = 919
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSS 187
+M +S DG+Y T DG++K+W+T + +T SS
Sbjct: 375 SMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 416
>U53346-1|AAB08084.1| 919|Homo sapiens PWP2H protein protein.
Length = 919
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSS 187
+M +S DG+Y T DG++K+W+T + +T SS
Sbjct: 375 SMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 416
>CR457279-1|CAG33560.1| 330|Homo sapiens WDR5B protein.
Length = 330
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 175
FS +GKY T T D LK+WD + YT
Sbjct: 218 FSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 249
>BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated
protein 1 protein.
Length = 2627
Score = 31.5 bits (68), Expect = 4.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 83 SEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVP 211
S D + +T+ G LK+WDT L ++T SLN ++ P
Sbjct: 1768 SPDCRLLATVCLGGCLKLWDTVRGQLAFQHTYPKSLNCVAFHP 1810
>BC043494-1|AAH43494.1| 330|Homo sapiens WD repeat domain 5B
protein.
Length = 330
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 175
FS +GKY T T D LK+WD + YT
Sbjct: 218 FSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 249
>BC014988-1|AAH14988.1| 919|Homo sapiens PWP2 periodic tryptophan
protein homolog (yeast) protein.
Length = 919
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSS 187
+M +S DG+Y T DG++K+W+T + +T SS
Sbjct: 375 SMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 416
>BC013309-1|AAH13309.1| 919|Homo sapiens PWP2 periodic tryptophan
protein homolog (yeast) protein.
Length = 919
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSS 187
+M +S DG+Y T DG++K+W+T + +T SS
Sbjct: 375 SMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 416
>AP001753-1|BAA95553.1| 919|Homo sapiens periodic tryptophan
protein 2 homolog protein.
Length = 919
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSS 187
+M +S DG+Y T DG++K+W+T + +T SS
Sbjct: 375 SMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 416
>AK002149-1|BAA92110.1| 330|Homo sapiens protein ( Homo sapiens
cDNA FLJ11287 fis, clone PLACE1009596, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 330
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 175
FS +GKY T T D LK+WD + YT
Sbjct: 218 FSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 249
>AB209438-1|BAD92675.1| 316|Homo sapiens PWP2 periodic tryptophan
protein homolog protein.
Length = 316
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSS 187
+M +S DG+Y T DG++K+W+T + +T SS
Sbjct: 95 SMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 136
>AB001517-2|BAA21137.1| 919|Homo sapiens PWP2 protein protein.
Length = 919
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSS 187
+M +S DG+Y T DG++K+W+T + +T SS
Sbjct: 375 SMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSS 416
>BC088354-1|AAH88354.1| 326|Homo sapiens G protein beta
subunit-like protein.
Length = 326
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEY 172
FS D +Y T + D ++W ET +K+EY
Sbjct: 278 FSGDSQYIVTASSDNLARLWCVETGEIKREY 308
>BC052292-1|AAH52292.1| 326|Homo sapiens GBL protein protein.
Length = 326
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEY 172
FS D +Y T + D ++W ET +K+EY
Sbjct: 278 FSGDSQYIVTASSDNLARLWCVETGEIKREY 308
>BC017119-1|AAH17119.1| 326|Homo sapiens G protein beta
subunit-like protein.
Length = 326
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEY 172
FS D +Y T + D ++W ET +K+EY
Sbjct: 278 FSGDSQYIVTASSDNLARLWCVETGEIKREY 308
>BC001313-1|AAH01313.1| 326|Homo sapiens G protein beta
subunit-like protein.
Length = 326
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEY 172
FS D +Y T + D ++W ET +K+EY
Sbjct: 278 FSGDSQYIVTASSDNLARLWCVETGEIKREY 308
>AY223837-1|AAO73410.1| 260|Homo sapiens LST8 protein.
Length = 260
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEY 172
FS D +Y T + D ++W ET +K+EY
Sbjct: 212 FSGDSQYIVTASSDNLARLWCVETGEIKREY 242
>AK097556-1|BAC05100.1| 518|Homo sapiens protein ( Homo sapiens
cDNA FLJ40237 fis, clone TESTI2023414. ).
Length = 518
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Frame = +2
Query: 71 EAMFSEDGKYYSTITKDGRLKIWD-----TETNVLKQEYTPXSSLNITSYVPTVD-NRQS 232
+ +F ++ +Y TI+K+G L IW ET + + T L +TS V + N+ +
Sbjct: 145 KVIFLKNSSHYLTISKEGLLAIWGEHLKLQETFPITSDATKLKHLWVTSLVSLENVNKIA 204
Query: 233 ISFKLKR-------EPKQFKCEYK 283
++F K ++F C+YK
Sbjct: 205 VAFTSKEVCFYDLLSKEEFACQYK 228
>AK074434-1|BAB85082.1| 293|Homo sapiens protein ( Homo sapiens
cDNA FLJ23854 fis, clone LNG06315. ).
Length = 293
Score = 31.1 bits (67), Expect = 5.6
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 297 QCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWS-RKYGLYSCTKDSRVYEW 473
QC++ G + K+ + I I+ K+TALD + + L SC++D +
Sbjct: 119 QCVMSGHFDKKIRFWDIRSESIVR----EMELLGKITALDLNPERTELLSCSRDDLLKVI 174
Query: 474 NIEDGSVKQTYN 509
++ ++KQT++
Sbjct: 175 DLRTNAIKQTFS 186
>AF195883-1|AAF04308.1| 230|Homo sapiens G protein beta subunit
protein.
Length = 230
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEY 172
FS D +Y T + D ++W ET +K+EY
Sbjct: 182 FSGDSQYIVTASSDNLARLWCVETGEIKREY 212
>AB209669-1|BAD92906.1| 1903|Homo sapiens Telomerase protein component
1 variant protein.
Length = 1903
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 83 SEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVP 211
S D + +T+ G LK+WDT L ++T SLN ++ P
Sbjct: 1110 SPDCQLLATVCLGGCLKLWDTVRGQLAFQHTYPKSLNCVAFHP 1152
>BC025392-1|AAH25392.1| 620|Homo sapiens WD repeat domain 16
protein.
Length = 620
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +2
Query: 14 TTXYREFLKI*VPKQ*NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLN 193
T+ RE L+I VP F DGK + DG+++ + ET L +
Sbjct: 361 TSSNRELLRITVPNM-TCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNAHRIG 419
Query: 194 ITSYVPTVDNRQSIS 238
+T+ T D ++ IS
Sbjct: 420 VTAIATTSDCKRVIS 434
>BC002489-1|AAH02489.1| 606|Homo sapiens WD repeat domain 1
protein.
Length = 606
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 74 AMFSEDGKYYSTITKDGRLKIWDT--ETNVLKQEYTP 178
A ++ G Y ++ G+L+IWDT + ++LK EY P
Sbjct: 64 AKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQP 100
>BC000201-1|AAH00201.1| 606|Homo sapiens WD repeat domain 1
protein.
Length = 606
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 74 AMFSEDGKYYSTITKDGRLKIWDT--ETNVLKQEYTP 178
A ++ G Y ++ G+L+IWDT + ++LK EY P
Sbjct: 64 AKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQP 100
>AK222897-1|BAD96617.1| 606|Homo sapiens WD repeat-containing
protein 1 isoform 1 variant protein.
Length = 606
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 74 AMFSEDGKYYSTITKDGRLKIWDT--ETNVLKQEYTP 178
A ++ G Y ++ G+L+IWDT + ++LK EY P
Sbjct: 64 AKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQP 100
>AK222764-1|BAD96484.1| 606|Homo sapiens WD repeat-containing
protein 1 isoform 1 variant protein.
Length = 606
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 74 AMFSEDGKYYSTITKDGRLKIWDT--ETNVLKQEYTP 178
A ++ G Y ++ G+L+IWDT + ++LK EY P
Sbjct: 64 AKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQP 100
>AK094847-1|BAC04435.1| 630|Homo sapiens protein ( Homo sapiens
cDNA FLJ37528 fis, clone BRCAN2012408. ).
Length = 630
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +2
Query: 14 TTXYREFLKI*VPKQ*NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLN 193
T+ RE L+I VP F DGK + DG+++ + ET L +
Sbjct: 371 TSSNRELLRITVPNM-TCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNAHRIG 429
Query: 194 ITSYVPTVDNRQSIS 238
+T+ T D ++ IS
Sbjct: 430 VTAIATTSDCKRVIS 444
>AK074435-1|BAB85083.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ23855 fis, clone LNG06370. ).
Length = 412
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +2
Query: 14 TTXYREFLKI*VPKQ*NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLN 193
T+ RE L+I VP F DGK + DG+++ + ET L +
Sbjct: 153 TSSNRELLRITVPNM-TCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNAHRIG 211
Query: 194 ITSYVPTVDNRQSIS 238
+T+ T D ++ IS
Sbjct: 212 VTAIATTSDCKRVIS 226
>AF020260-1|AAD05045.1| 534|Homo sapiens WDR1 protein protein.
Length = 534
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 74 AMFSEDGKYYSTITKDGRLKIWDT--ETNVLKQEYTP 178
A ++ G Y ++ G+L+IWDT + ++LK EY P
Sbjct: 64 AKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQP 100
>AF020056-1|AAD05044.1| 606|Homo sapiens WDR1 protein protein.
Length = 606
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 74 AMFSEDGKYYSTITKDGRLKIWDT--ETNVLKQEYTP 178
A ++ G Y ++ G+L+IWDT + ++LK EY P
Sbjct: 64 AKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQP 100
>AB209746-1|BAD92983.1| 624|Homo sapiens WD repeat-containing
protein 1 isoform 1 variant protein.
Length = 624
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 74 AMFSEDGKYYSTITKDGRLKIWDT--ETNVLKQEYTP 178
A ++ G Y ++ G+L+IWDT + ++LK EY P
Sbjct: 82 AKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQP 118
>AB065281-1|BAB83743.1| 620|Homo sapiens WDR16 protein.
Length = 620
Score = 30.3 bits (65), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +2
Query: 14 TTXYREFLKI*VPKQ*NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLN 193
T+ RE L+I VP F DGK + DG+++ + ET L +
Sbjct: 361 TSSNRELLRITVPNM-TCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNAHRIG 419
Query: 194 ITSYVPTVDNRQSIS 238
+T+ T D ++ IS
Sbjct: 420 VTAIATTSDCKRVIS 434
>AB010427-1|BAA31855.2| 606|Homo sapiens NORI-1 protein.
Length = 606
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 74 AMFSEDGKYYSTITKDGRLKIWDT--ETNVLKQEYTP 178
A ++ G Y ++ G+L+IWDT + ++LK EY P
Sbjct: 64 AKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQP 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,544,874
Number of Sequences: 237096
Number of extensions: 2566030
Number of successful extensions: 5305
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 4653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5303
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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