Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_E13
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 32 0.63
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 31 1.4
AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble guany... 30 1.9
Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical pr... 30 2.5
AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate cyc... 30 2.5
Z81484-8|CAE11295.1| 325|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 29 3.3
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical ... 29 4.4
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 29 5.8
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 29 5.8
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 28 7.7
U42436-6|AAM15564.1| 615|Caenorhabditis elegans Not-like (yeast... 28 7.7
U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast... 28 7.7
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 28 7.7
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 28 7.7
AF025453-10|AAK31402.3| 487|Caenorhabditis elegans Hypothetical... 28 7.7
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 71 EAMFSEDGKYYSTITKDGRLKIWDTETN 154
+A+FS +G+Y T D ++KIWD E N
Sbjct: 330 DAIFSSEGRYIFTGGNDNQVKIWDVENN 357
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETN 154
++ + +SE+ + Y T +KDG +KIWD +N
Sbjct: 261 SVTDVHYSENARLYVTASKDGHVKIWDGVSN 291
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 175
++ A F+++GKY T D +K+W+ TN YT
Sbjct: 305 SICSAKFTKNGKYILTSGMDSIVKLWELSTNRCLIVYT 342
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 31.9 bits (69), Expect = 0.63
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 71 EAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEY 172
E F+ +G + + + D +K+WDTET +KQ +
Sbjct: 324 EVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRF 357
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWD 142
FSE+G Y +T ++DG +K+WD
Sbjct: 388 FSENGYYLATGSEDGEVKLWD 408
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ + S DG++ + + D L++WD V +++ + ++ S + DNRQ +S
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTK-DVLSVAFSADNRQIVS 128
>AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble
guanylate cyclase protein.
Length = 684
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 594 YLVTASYQLSLWRL--HNKDVTLIKSLGYSTSQTAILSLVSFNDA 722
Y +T S + S+W + H++D+ + GY +TAI + V+ A
Sbjct: 625 YFLTRSLKKSIWEIIDHDRDINVSSIEGYEELETAIENAVTIKSA 669
>Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical
protein C06B3.8 protein.
Length = 646
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 594 YLVTASYQLSLWRL--HNKDVTLIKSLGYSTSQTAILSLVSFNDA 722
Y +T S + S+W + H++D+ + GY +TAI + V+ A
Sbjct: 587 YFLTRSLKKSIWEIIDHDRDINVNSIEGYEELETAIENAVTIKSA 631
>AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 684
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 594 YLVTASYQLSLWRL--HNKDVTLIKSLGYSTSQTAILSLVSFNDA 722
Y +T S + S+W + H++D+ + GY +TAI + V+ A
Sbjct: 625 YFLTRSLKKSIWEIIDHDRDINVNSIEGYEELETAIENAVTIKSA 669
>Z81484-8|CAE11295.1| 325|Caenorhabditis elegans Hypothetical
protein C47A10.9 protein.
Length = 325
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 VTASYQLSLWRLHNKDVTLIKSLGYSTSQTAILSLV-SFNDAYYIV 734
V A + L LW D ++ LG++T+ +S++ +F + YYI+
Sbjct: 72 VLAGFPLGLWSWLEVDTGIVMFLGFTTAFLMPISVIKTFENRYYIL 117
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 62 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
+++ A FS GKY T + D +KIW+ + + ++ T L + + D+R +S
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLT-GHKLGVNDIAWSSDSRCVVS 146
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 175
+A FS +GKY D LK+WD ++YT
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 74 AMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSISFKL 247
A +S DG +T +DG++KIW++ ++ + +S +T+ T R +S L
Sbjct: 366 AEYSPDGSLMATGAEDGKVKIWNSRSSFCTVTFDEHTS-GVTAVKWTQSGRAILSASL 422
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 459 RVYEWNIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQL 620
R W D S+ + + NN +N N +IPH +S +L+T +QL
Sbjct: 110 RCCNWAFPDKSLLHIHLQTATNNNDSNNNNN--SVIPHGVINRSCHLITDPFQL 161
>AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical
protein F56H1.3 protein.
Length = 1174
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 609 SYQLSLWRLHNKDVTLIKSLGYSTSQTAILSLVSFNDAYYIV 734
S QL WR HN D +K +G S S + +L S ND Y++
Sbjct: 604 SNQLECWRTHNFDPIKLK-IGASFS-SVLLKFPSENDMKYVI 643
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 321 NGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNIEDG 488
+G + I+ Q ++ + H +A VT L W + +YS ++D V W +DG
Sbjct: 216 DGNIFIWDTVQGTVVRCL--SGH-TASVTCLRWGGEGLIYSGSQDRTVKMWRADDG 268
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTI-TKDGRLKIWDTETNVL 160
+A FSEDGKY +T +DG++ + T + L
Sbjct: 1248 IAAVAFSEDGKYLATYGAEDGKINFFQTSQSFL 1280
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +3
Query: 303 IVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG----LYSCTKDSRVYE 470
I+ G NG ++I+ +++ ++ + H S K+TA+ + S + D RV
Sbjct: 42 IITGAENGHIIIWKLAEG-LMPKQLMIGH-SQKITAISQTTNTPTNTRFVSASADGRVCL 99
Query: 471 WNIEDG-SVKQTYNISI 518
W I+DG + T +I+I
Sbjct: 100 WEIQDGRCIDSTSSIAI 116
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
FS D + +T + DG++K+W ET + + + + + + DN +S
Sbjct: 272 FSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILS 324
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 65 MAEAMFSEDGKYYSTITKDGRLKIWDTET 151
++ F+ DG Y ++ + DG ++IWD+ T
Sbjct: 235 VSSVCFNRDGAYLASGSYDGIVRIWDSTT 263
>U42436-6|AAM15564.1| 615|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 4, isoform b protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 309 LGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYE 470
L + +L S S+ + + PAKH A + W GL S + S + E
Sbjct: 201 LDVNDDRLARTSFSENDYLGIPAPAKHQEAPAPLMQWEALLGLSSPSAQSTIVE 254
>U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 4, isoform a protein.
Length = 796
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 309 LGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYE 470
L + +L S S+ + + PAKH A + W GL S + S + E
Sbjct: 382 LDVNDDRLARTSFSENDYLGIPAPAKHQEAPAPLMQWEALLGLSSPSAQSTIVE 435
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 438 YSCTKDSRVYEWNIEDGSVKQTYNISIENN 527
YSCT +NI + ++ YNIS E N
Sbjct: 370 YSCTSKCNSVRYNINNNDDEELYNISGETN 399
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +2
Query: 80 FSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 238
FS D + +T + DG++K+W ET + + + + + + DN +S
Sbjct: 272 FSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILS 324
>AF025453-10|AAK31402.3| 487|Caenorhabditis elegans Hypothetical
protein C08F1.1 protein.
Length = 487
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 504 YNISIENNTKQGSNINAIKIIPHNQH-KKSRYLVTASYQLSLWRLHNKDVTL 656
++ISI+NN + ++ + N+ +K R+ + ASYQLSL H +TL
Sbjct: 306 WSISIKNN----NGFASLMLNCENELIEKERWAIQASYQLSLVYCHGNRITL 353
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,694,630
Number of Sequences: 27780
Number of extensions: 408616
Number of successful extensions: 1139
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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