Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_E12
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0254 - 27177167-27177393,27177476-27177725,27177818-271780...    29   6.4  
03_05_0131 - 21107865-21108085,21108517-21108766,21110310-211105...    28   8.5  

>02_05_0254 -
           27177167-27177393,27177476-27177725,27177818-27178054,
           27178138-27178296,27179454-27179527,27180929-27181172
          Length = 396

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 522 GCSSWNVLCENSHLYLYWKL 581
           GC+    LC+N H YL+W L
Sbjct: 341 GCTPNATLCDNRHDYLFWDL 360


>03_05_0131 -
           21107865-21108085,21108517-21108766,21110310-21110549,
           21111104-21111234,21114107-21114365
          Length = 366

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 504 ESSALFGCSSWNVLCENSHLYLYW 575
           +++A+F CS  +V C+N   Y++W
Sbjct: 307 DNNAMFLCSPASVYCDNRTSYMFW 330


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,782,445
Number of Sequences: 37544
Number of extensions: 304698
Number of successful extensions: 586
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)