Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_E10
(978 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.011
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.081
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.11
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.19
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.25
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 0.81
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 2.3
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 3.0
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.0
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 27 3.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.3
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 26 7.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.007
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = +3
Query: 723 PPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPPP 890
PP P PP +G P G+ P PPP P PP PPPP
Sbjct: 311 PP--PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 35.5 bits (78), Expect = 0.011
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +3
Query: 708 PXXGXPPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXG--XP 881
P G P PP P G P + P PPP P PPL
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 882 PPPXXTP 902
PP TP
Sbjct: 414 TPPVPTP 420
Score = 34.7 bits (76), Expect = 0.020
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 814 PPPPPPHXXKXXXPXPPXGGGXPPPP 891
PPPPP P PP G PPPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 32.3 bits (70), Expect = 0.11
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +3
Query: 708 PXXGXPPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXP-XPPLXXGXP- 881
P P P P P P GA P P PP P PPL P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 882 PPPXXTP 902
PPP P
Sbjct: 476 PPPAPAP 482
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +2
Query: 692 GXXEXPXXGXPPPXAPPPXRXPXKRRAPPXXGGXXXXXXXXXPPP 826
G P G P PPP P R PP PPP
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.5 bits (63), Expect = 0.75
Identities = 22/87 (25%), Positives = 24/87 (27%), Gaps = 12/87 (13%)
Frame = +1
Query: 676 PPPXGGXXGXPPXGXAPPXGPXPL-------XXXXXXXXXXXXXXXXXPXXXXPPPPPPH 834
PPP G PP P P + PPPPP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Query: 835 XXKXXXPXPPXGGG-----XPPPPXXP 900
+ PP G G PPPP P
Sbjct: 317 PSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.5 bits (63), Expect = 0.75
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +3
Query: 726 PXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPPPXXTP 902
P P PP P P P PP PP PPL G P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI--APPLPAGMPAAPPLPP 471
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -2
Query: 788 PPXGVGXAFXGAXXRGXGPXGGAXPXGGXPXXPPXGGGXPPXPPPXXA 645
PP G G + P A G P PP G PP PPP A
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAA--GSIPL-PPQGRSAPPPPPPRSA 369
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.5 bits (78), Expect = 0.011
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Frame = -3
Query: 901 GVXXGGGGXPXXRGGXGXXFXXGGGG---GGXGXXXXGXXAPXXGWGXPFXGPS--XGGX 737
G G GG P GG G GG G GG G G G G GP GG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 736 GXWGGXP 716
G +GG P
Sbjct: 252 GGFGGGP 258
Score = 31.5 bits (68), Expect = 0.19
Identities = 22/62 (35%), Positives = 24/62 (38%)
Frame = -3
Query: 901 GVXXGGGGXPXXRGGXGXXFXXGGGGGGXGXXXXGXXAPXXGWGXPFXGPSXGGXGXWGG 722
G G GG GG G GGG GG G G+G G GG G +GG
Sbjct: 208 GGFGGFGGEGHHHGGHGGF---GGGPGGFEGGPGGFGGGPGGFGGGLGG-FGGGPGGFGG 263
Query: 721 XP 716
P
Sbjct: 264 GP 265
Score = 30.7 bits (66), Expect = 0.33
Identities = 28/81 (34%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = -2
Query: 830 GGGGGGXXXXGXXGPPXGVG--XAFXGAXXRGXGPXGGAXPXGGXPXXPPXG-GGXPPXP 660
GGG GG G GPP G G F G G GG GG P G GG P
Sbjct: 187 GGGFGG-FGGGSGGPPPGPGGFGGFGGFGGEGH-HHGGHGGFGGGPGGFEGGPGGFGGGP 244
Query: 659 PPXXAXXXXFPGXGGGXXXXP 597
F G GG P
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGP 265
Score = 30.3 bits (65), Expect = 0.43
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -3
Query: 865 RGGXGXXFXXGGGGGGXGXXXXGXXAPXXGWGXPFXGPSXGGXGXWGGXP 716
RG G F GGG G G G+G G GG G +GG P
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGE--GHHHGGHGGFGGGP 230
Score = 30.3 bits (65), Expect = 0.43
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 845 FXSXWGGGGGGXXXXGXXGPPXGVGXAFXGAXXRGXGPXGGAXPXGGXPXXPPXGGGXP 669
F G GG G G G G G G G GP G GG P GG P
Sbjct: 207 FGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 29.1 bits (62), Expect = 1.00
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -3
Query: 886 GGGXPXXRGGXGXXFXXGGGGGGXGXXXXGXXAPXXGWGXPFXGPSXGGXGXW 728
GGG GG G GGG GG G G G+G GP G W
Sbjct: 227 GGGPGGFEGGPG---GFGGGPGGFGGGLGGFGGGPGGFG---GGPGGHGGPGW 273
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 655 GGGXGGXPPPXGGXXG 702
GGG GG PP GG G
Sbjct: 194 GGGSGGPPPGPGGFGG 209
Score = 26.2 bits (55), Expect = 7.0
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = -3
Query: 901 GVXXGGGGXPXXRGGXGXXFXXGGGG-GGXGXXXXGXXAPXXGWGXP 764
G G GG GG G GGG GG G G G G P
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 25.8 bits (54), Expect = 9.3
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = -2
Query: 827 GGGGGXXXXGXXGPPXGVGXAFXGAXXRGXGPXG-GAXPXG-GXP 699
GGG G G G G G G G GP G G P G G P
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.081
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +3
Query: 756 PXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXP-XPPLXXGXP--PPP 890
P P A P P PPPPP P PP+ G P PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +3
Query: 708 PXXGXPPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXP 860
P PP P P P P P PPPP P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +1
Query: 817 PPPPPHXXKXXXPXPPXGGGXP--PPPXXP 900
PPPPP PP G P PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.0
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +3
Query: 717 GXPPXXPXP-PXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPPP 890
G P P P P P P A P PPPP PP PPPP
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAP-PQMSAPTPPPPPMSVPPPPSAPPMPAGPP---SAPPPP 1734
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.11
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = +3
Query: 708 PXXGXPPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPP 887
P G PP P P P P P P PP PPP P P G PP
Sbjct: 1174 PSSGIPPV-PKPAAGVPP--VPPPSEAPPVPKPSVGVPPVPPP-STAPPVPTPSAGLPPV 1229
Query: 888 PXXT 899
P T
Sbjct: 1230 PVPT 1233
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 726 PXXPXPPXXGPXKGXPHPXXGAXXPXXXXPX--PPPPPPXXKXXPXPPLXXGXPPPP 890
P PP P P P P P PP P P P P G PP P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 31.9 bits (69), Expect = 0.14
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
Frame = +3
Query: 708 PXXGXPPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXP-- 881
P P P P P P P P PP P P P P G P
Sbjct: 1134 PVPSGAPPVPKPSVAAPP--VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 882 PPPXXTP 902
PPP P
Sbjct: 1192 PPPSEAP 1198
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 726 PXXPXPPXXGPXKGXPH-PXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPPPXXTP 902
P PP P G P P A P P PP P PP+ PP TP
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG-VPPVPPPSTAPPVPTP 1222
Score = 31.5 bits (68), Expect = 0.19
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +3
Query: 726 PXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXP-PLXXGXPPPP 890
P PP P P P P P PP P P P G PP P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 31.5 bits (68), Expect = 0.19
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = +3
Query: 708 PXXGXPPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPP- 884
P P P P P P P G PP PP + P P G PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPP--VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 885 PPXXT 899
PP T
Sbjct: 1211 PPPST 1215
Score = 31.1 bits (67), Expect = 0.25
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 716 PXGGXPXXPPXGGGXPPXPPPXXAXXXXFPGXG 618
P G P P G PP PPP A P G
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Frame = +3
Query: 726 PXXPXPPXXGPXKGXPHPXXGAXXPXXXXP---XPPPPPPXXKXXPXPPLXXGXPPP 887
P PP P P P P P PP P P P PP P P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 723 PPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPPP 890
P PP P P P + P PPP P P P G PP P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSA----PPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 27.9 bits (59), Expect = 2.3
Identities = 22/85 (25%), Positives = 22/85 (25%), Gaps = 3/85 (3%)
Frame = +1
Query: 616 PPXPGNXXXXAXXGGGXGGXPP---PXGGXXGXPPXGXAPPXGPXPLXXXXXXXXXXXXX 786
PP P G PP P G PP APP P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV-PKPSVGVPPVPPPSTAP 1217
Query: 787 XXXXPXXXXPPPPPPHXXKXXXPXP 861
P PP P P P P
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -2
Query: 716 PXGGXPXXPPXGGGXPPXPPPXXAXXXXFPGXG 618
P P P G PP PPP A P G
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Frame = +3
Query: 762 KGXPHPXXGAXXPXXXXPXPPPPPPXX-KXXPXPPLXXGXPPPPXXTP 902
K P P A P P PP P P P G P P P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/60 (25%), Positives = 16/60 (26%)
Frame = +3
Query: 708 PXXGXPPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPP 887
P P P P P P + P P PP P P P PP
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 26.2 bits (55), Expect = 7.0
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 726 PXXPXPPXXGPXKGXPHPXXGAXXPXXXXP--XPPPPPPXXKXXPXPPLXXGXPPPP 890
P P PP P P + P P PP P P P P PP P
Sbjct: 1060 PSAP-PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +3
Query: 726 PXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPPP 890
P P P P P P PPPPPP PP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP----PPPPP 782
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +3
Query: 735 PXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPPPXXTP 902
P PP P P P PPPPP P P + PPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-----PPPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 799 PXXXXPPPPPPHXXKXXXPXPPXG--GGXPPPPXXP 900
P PPP P P PP G G PPPP P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 723 PPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPP 836
P P PP G P P P PPPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.75
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +3
Query: 723 PPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPPP 890
PP P PP P P PPPPPP PP PPPP
Sbjct: 732 PP--PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP--PPPPPPP 783
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
Frame = -2
Query: 710 GGXPXXPPX----GGGXPPXPPPXXA 645
GG P PP G G PP PPP A
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 9/37 (24%)
Frame = +1
Query: 817 PPPPPHXXKXXXPXP---------PXGGGXPPPPXXP 900
PPPPP P P P GG PPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 799 PXXXXPPPPPPHXXKXXXPXPPXGGGXPPPP 891
P P P P P P GG PPPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 677 PPXXGGXXEXPXXGXPPPXAPPPXRXPXKRRAPPXXGGXXXXXXXXXPPPPP 832
PP P P PPP PP G PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 613 PPPXPGNXXXXAXXGGGXGGXPPPXGGXXGXPPXGXAPP 729
P P P A GG PPP G PP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 734 PXGGAXPXGGXPXXPPXGGGXPPXPPPXXA 645
P P P P GG PP PPP A
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVA 771
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.19
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +3
Query: 708 PXXGXPPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPP 887
P PP P P K P P P PP PP+ PPP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 888 P 890
P
Sbjct: 205 P 205
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/65 (26%), Positives = 17/65 (26%), Gaps = 5/65 (7%)
Frame = +3
Query: 723 PPXXPXPPXXG-----PXKGXPHPXXGAXXPXXXXPXPPPPPPXXKXXPXPPLXXGXPPP 887
PP P PP P P P P P P PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 888 PXXTP 902
P P
Sbjct: 184 PPSAP 188
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Frame = +3
Query: 813 PXPPPPPP---XXKXXPXPPLXXG 875
P PPPPPP P PPL G
Sbjct: 3 PAPPPPPPAPAPAAAAPAPPLMTG 26
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.25
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 813 PXPPPPPPXXKXXPXPPLXXGXPPPP 890
P PPPPPP + PP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPP----PPPPP 30
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 716 GXPPPXAPPPXRXPXKRRAPPXXGG 790
G PPP PPP P + PP G
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 799 PXXXXPPPPPPHXXKXXXPXPPXGGGXPPPP 891
P PPPPPP + PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFE-----PPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 716 PXGGXPXXPPXGGGXPPXPPP 654
P G P PP G PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP 25
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.6 bits (51), Expect(2) = 0.81
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 798 PXXXXPXPPPPPP 836
P P PPPPPP
Sbjct: 184 PSDYNPPPPPPPP 196
Score = 23.4 bits (48), Expect(2) = 3.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 813 PXPPPPPP 836
P PPPPPP
Sbjct: 236 PAPPPPPP 243
Score = 23.0 bits (47), Expect(2) = 0.81
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +3
Query: 822 PPPPPXXKXXPXPPLXXGXPPPPXXTP 902
P PP PL PPPP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLP 247
Score = 21.8 bits (44), Expect(2) = 3.8
Identities = 11/42 (26%), Positives = 11/42 (26%)
Frame = +3
Query: 708 PXXGXPPXXPXPPXXGPXKGXPHPXXGAXXPXXXXPXPPPPP 833
P P PP P P PPPPP
Sbjct: 156 PTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 799 PXXXXPPPPPPHXXKXXXPXPP----XGGGXPPPP 891
P PPPP H P PP G PPPP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 799 PXXXXPPPPPPHXXKXXXPXPP----XGGGXPPPP 891
P PPPP H P PP G PPPP
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 799 PXXXXPPPPPPHXXKXXXPXPP----XGGGXPPPP 891
P PPPP H P PP G PPPP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 799 PXXXXPPPPPPHXXKXXXPXPP----XGGGXPPPP 891
P PPPP H P PP G PPPP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 799 PXXXXPPPPPPHXXKXXXPXPP----XGGGXPPPP 891
P PPPP H P PP G PPPP
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 889 GGGGXPXXRGGXGXXFXXGGGGGGXGXXXXGXXAPXXG 776
GG G RGG G G GG G G AP G
Sbjct: 457 GGRGGFGGRGGFGGGRGRGRGGARSGNPNRGSVAPFSG 494
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -3
Query: 901 GVXXGGGGXPXXRGGXGXXFXXGGG-GGGXGXXXXGXXAPXXGWGXPFXG 755
G GG G RGG G GGG G G G G P G PF G
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGN--PNRGSVAPFSG 494
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -3
Query: 883 GGXPXXRGGXGXXFXXGGGGGGXGXXXXGXXAPXXGWGXPFXGPSXGG 740
GG RGG G G GGG G G G F G S GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG---GFRGGSRGG 189
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.5 bits (58), Expect = 3.0
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = -2
Query: 830 GGGGGGXXXXGXXGPPXGVGXAFXGAXXRGXG-PXGGAXPXGGXPXXP------PXGGGX 672
GG GGG G + F G RG G P G A GG P P GG
Sbjct: 137 GGMGGGMGGMGGMDDDMDMDGGF-GTRTRGGGMPGGFANMFGGGGAGPHARRSHPSFGGS 195
Query: 671 PPXPPP 654
P PP
Sbjct: 196 RPSQPP 201
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.3
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = -3
Query: 901 GVXXGGGGXPXXRGGXGXXFXXGGGGGGXGXXXXGXXAPXXGWGXPFXGPSXGGXGXWGG 722
G G GG RGG G G GGG G G G G S G G GG
Sbjct: 13 GSRGGRGGFNGGRGGFGGG-RGGARGGGRGGARGGRGGRGGARGGR-GGSSGGRGGAKGG 70
Score = 25.8 bits (54), Expect = 9.3
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = -3
Query: 901 GVXXGGGGXPXXRGGX-GXXFXXGGGGGGXGXXXXGXXAPXXGWGXPFXGPSXGGXGXWG 725
G G GG RGG G GGG GG G G G G G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 724 G 722
G
Sbjct: 66 G 66
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 655 GGGXGGXPPPXGGXXGXPPXGXAP 726
G G PPP G G PP G P
Sbjct: 123 GVGYTAPPPPAGFGRGAPPPGFRP 146
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.152 0.547
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,902,857
Number of Sequences: 5004
Number of extensions: 31481
Number of successful extensions: 400
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 503290872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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